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CGView (Circular Genome Viewer) is a freely available downloadable Java software program, applet and API (application programming interface) for generating colorful, zoomable, hyperlinked, richly annotated images of circular genomes such as bacterial chromosomes, mitochondrial DNA and plasmids.
These bacterial genome maps are generated used a program called CGView (Circular Genome Viewer) which was developed in 2004. [3] The genome maps are designed to allow rapid navigation and detailed visualization of all the BASys-generated gene annotations. A complete BASys run takes approximately 16 h for an average bacterial chromosome ...
A circular chromosome is a chromosome in bacteria, archaea, mitochondria, and chloroplasts, in the form of a molecule of circular DNA, unlike the linear chromosome of most eukaryotes. Most prokaryote chromosomes contain a circular DNA molecule. This has the major advantage of having no free ends to the DNA.
The programme can handle an enormous amount of single-end reads generated by the next-generation Illumina/Solexa Genome Analyzer. cREAL is a simple extension of REAL for aligning short reads obtained from next-generation sequencing to a genome with circular structure. Yes Yes Free, GPL: RMAP
Rolling circle replication produces multiple copies of a single circular template. Rolling circle replication (RCR) is a process of unidirectional nucleic acid replication that can rapidly synthesize multiple copies of circular molecules of DNA or RNA, such as plasmids, the genomes of bacteriophages, and the circular RNA genome of viroids. Some ...
An interactive viewer for large phylogenetic trees and networks: All [22] DensiTree A viewer capable of viewing multiple overlaid trees. All [23] FigTree: Simple Java tree viewer able to read newick and nexus tree files. Can be used to color branches and produce vector artwork. All [24] JEvTrace
Circular Genomics claims its new form of genetic testing can identify which medications will work for a patient in a fraction of that time. As some of our readers no doubt already know ...
Dendroscope is an interactive computer software program written in Java for viewing Phylogenetic trees. [1] This program is designed to view trees of all sizes and is very useful for creating figures.