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Previously, iminodiacetic acid was used for that purpose. Now, nitrilotriacetic acid is more commonly used. [12] For laboratory uses, Ernst Hochuli et al. (1987) coupled the NTA ligand and nickel ions to agarose beads. [13] This Ni-NTA Agarose is the most used tool to purify His-tagged proteins via affinity chromatography. NTA complexes
162,041 structures in the PDB have a structure factor file. 11,242 structures have an NMR restraint file. 5,774 structures in the PDB have a chemical shifts file. 13,388 structures in the PDB have a 3DEM map file deposited in EM Data Bank. Most structures are determined by X-ray diffraction, but about 7% of structures are determined by protein ...
Acetic acid: an organic acid; is one of the simplest carboxylic acids: Acetone: an organic compound; simplest example of the ketones: Acetylene: a hydrocarbon and the simplest alkyne; widely used as a fuel and chemical building block Ammonia: inorganic; the precursor to most nitrogen-containing compounds; used to make fertilizer Ammonium hydroxide
An aminopolycarboxylic acid (sometimes abbreviated APCA) is a chemical compound containing one or more nitrogen atoms connected through carbon atoms to two or more carboxyl groups. Aminopolycarboxylates that have lost acidic protons form strong complexes with metal ions.
Database of Comparative Protein Structure Models: Ursula Pieper, Ben Webb, Narayanan Eswar, Andrej Sali Roberto Sanchez UCSF, Sali Lab 3D structure protein databases PDBsum: Pictorial database of 3D structures in the Protein Data Bank: European Bioinformatics Institute 2013 Wellcome Trust 3D structure protein databases CCDS
Examples of methods for adding polyhistidine tags. (A) The polyhistidine tag is added by inserting the DNA encoding a protein of interest in a vector that has the tag ready to fuse at the C-terminus. (B) The polyhistidine tag is added using primers containing the tag coding sequence as an overhang on the forward primer. After PCR amplification ...
This reaction is rapid and stoichiometric, with the addition of one mole of thiol releasing one mole of TNB. The TNB 2− is quantified in a spectrophotometer by measuring the absorbance of visible light at 412 nm, using an extinction coefficient of 14,150 M −1 cm −1 for dilute buffer solutions, [4] [5] and a coefficient of 13,700 M −1 cm −1 for high salt concentrations, such as 6 M ...
Nucleic acid NMR is the use of NMR spectroscopy to obtain information about the structure and dynamics of nucleic acid molecules, such as DNA or RNA. As of 2003, nearly half of all known RNA structures had been determined by NMR spectroscopy. [2] Nucleic acid NMR uses similar techniques as protein NMR, but has several differences.