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samtools sort -m 5000000 unsorted_in.bam sorted_out Read the specified unsorted_in.bam as input, sort it in blocks up to 5 million k (5 Gb) [ units verification needed ] and write output to a series of bam files named sorted_out.0000.bam , sorted_out.0001.bam , etc., where all bam 0 reads come before any bam 1 read, etc. [ verification needed ]
www.htslib.org /doc /samtools-mpileup.html Pileup format is a text-based format for summarizing the base calls of aligned reads to a reference sequence. This format facilitates visual display of SNP /indel calling and alignment.
SAM files can be analysed and edited with the software SAMtools. [1] The header section must be prior to the alignment section if it is present. Headings begin with the '@' symbol, which distinguishes them from the alignment section. Alignment sections have 11 mandatory fields, as well as a variable number of optional fields. [1]
The easiest way to start citing on Wikipedia is to see a basic example. The example here will show you how to cite a newspaper article using the {} template (see Citation quick reference for other types of citations). Copy and paste the following immediately after what you want to reference:
To use it, click on Cite at the top of the edit window, having already positioned your cursor after the sentence or fact you wish to reference. Then select one of the 'Templates' from the dropdown menu that best suits the type of source.
Citations are important in Wikipedia to ensure that information comes from actual, reliable sources (WP:V, WP:CITE).There are three preferred ways of citing sources: ...
{{External media}} – to link to external media, including YouTube videos {{Cite AV media}} – to cite a video {} – to cite a newscast {{Cite episode}} – to cite an episode of a show {{Cite serial}} – to cite a serial of a show {{YouTube navbox}} – navigation box for YouTube related articles; WP:YOUTUBE – YouTube linking guideline
This page is within the scope of the Wikipedia Help Project, a collaborative effort to improve Wikipedia's help documentation for readers and contributors.If you would like to participate, please visit the project page, where you can join the discussion and see a list of open tasks.
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