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  2. Swiss-model - Wikipedia

    en.wikipedia.org/wiki/Swiss-model

    The Swiss-model Workspace integrates programs and databases required for protein structure prediction and modelling in a web-based workspace. Depending on the complexity of the modelling task, different modes of use can be applied, in which the user has different levels of control over individual modelling steps: automated mode, alignment mode, and project mode.

  3. List of protein subcellular localization prediction tools

    en.wikipedia.org/wiki/List_of_protein_sub...

    With BAR 3.0 and a sequence you can annotate when possible: function (Gene Ontology), structure (Protein Data Bank), protein domains (Pfam). Also if your sequence falls into a cluster with a structural/some structural template/s we provide an alignment towards the template/templates based on the Cluster-HMM (HMM profile) that allows you to ...

  4. UniProt - Wikipedia

    en.wikipedia.org/wiki/UniProt

    UniProtKB/Swiss-Prot is a manually annotated, non-redundant protein sequence database. It combines information extracted from scientific literature and biocurator-evaluated computational analysis. The aim of UniProtKB/Swiss-Prot is to provide all known relevant information about a particular protein.

  5. Template:Swiss-model - Wikipedia

    en.wikipedia.org/wiki/Template:Swiss-model

    Main page; Contents; Current events; Random article; About Wikipedia; Contact us

  6. Protein Information Resource - Wikipedia

    en.wikipedia.org/wiki/Protein_Information_Resource

    In 2002, PIR – along with its international partners, the European Bioinformatics Institute and the Swiss Institute of Bioinformatics – were awarded a grant from NIH to create UniProt, a single worldwide database of protein sequence and function, by unifying the Protein Information Resource-Protein Sequence Database, Swiss-Prot, and TrEMBL ...

  7. PROSITE - Wikipedia

    en.wikipedia.org/wiki/PROSITE

    PROSITE is a protein database. [1] [2] It consists of entries describing the protein families, domains and functional sites as well as amino acid patterns and profiles in them.. These are manually curated by a team of the Swiss Institute of Bioinformatics and tightly integrated into Swiss-Prot protein annotati

  8. Protein structure database - Wikipedia

    en.wikipedia.org/wiki/Protein_structure_database

    a protein databases that includes visuals of protein structure. Also, includes protein pathways and gene sequences including other tools. SCOP the Structural Classification of Proteins a detailed and comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known. SWISS-MODEL Repository

  9. Homology modeling - Wikipedia

    en.wikipedia.org/wiki/Homology_modeling

    Homology model of the DHRS7B protein created with Swiss-model and rendered with PyMOL. Homology modeling, also known as comparative modeling of protein, refers to constructing an atomic-resolution model of the "target" protein from its amino acid sequence and an experimental three-dimensional structure of a related homologous protein (the "template").