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231861 Ensembl ENSG00000182095 ENSMUSG00000039477 UniProt O15417 Q80WC3 RefSeq (mRNA) NM_001013722 NM_001080495 NM_001122730 NM_178242 RefSeq (protein) NP_001073964 NP_001116202 NP_839973 Location (UCSC) Chr 7: 5.31 – 5.43 Mb Chr 5: 142.72 – 142.82 Mb PubMed search Wikidata View/Edit Human View/Edit Mouse Trinucleotide repeat containing 18 is a protein that in humans is encoded by the ...
Sequence Similarity (EMBOSS Needle) [28] Homo sapiens: Human 0 mya NP_001287869.1 468 aa 100% 100% Mus musclus: House Mouse 88 mya NP_766610.2 445 aa 94.5% 91.7%
EMBOSS is an acronym for European Molecular Biology Open Software Suite. The European part of the name hints at the wider scope. The core EMBOSS groups are collaborating with many other groups to develop the new applications that the users need. This was done from the beginning with EMBnet, the European Molecular Biology Network. EMBnet has ...
EMBL-EBI-SAPS [14] found the human C6ORF47 protein to have a isoelectric point of 5.95. C6ORF47 protein was shown to be slightly more abundant than half of the proteins present in the human body. [15]
Orthologs are grouped by taxonomic class and then sorted first by increasing date of divergence (MYA) and second by percent sequence identity to the human protein. Date of divergence was calculated using the pairwise divergence median time from Timetree.org. [29] Percent sequence identity and similarity were calculated using EMBOSS Needle. [26]
401097 68725 Ensembl ENSG00000180044 ENSMUSG00000046999 UniProt F5H4A9 E9Q0B3 RefSeq (mRNA) NM_001168214 NM_001167996 RefSeq (protein) NP_001161686 NP_001161468 Location (UCSC) Chr 3: 160.23 – 160.23 Mb Chr 3: 68.78 – 68.78 Mb PubMed search Wikidata View/Edit Human View/Edit Mouse Membrane protein C3orf80 (C3orf80) is a human protein encoded by the C3orf80 gene. Gene C3orf80 is on ...
In order to take this difference into consideration, the concepts of gap opening and gap extension have been added to the scoring system. The gap opening score is usually higher than the gap extension score. For instance, the default parameters in EMBOSS Water are: gap opening = 10, gap extension = 0.5.
The TMEM247 gene is located on chromosome 2 at c2p21, nucleotide: 46,479,565-46,484,425.It has three exons and two introns. TMEM247 is 4,861 nucleotides (nt) long pre-mRNA processing, reduced to 661 nt after mRNA processing and its protein product is 219 amino acids (aa) long. [6]