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There are two distinctive mapping approaches used in the field of genome mapping: genetic maps (also known as linkage maps) [7] and physical maps. [3] While both maps are a collection of genetic markers and gene loci, [8] genetic maps' distances are based on the genetic linkage information, while physical maps use actual physical distances usually measured in number of base pairs.
A linkage map (also known as a genetic map) is a table for a species or experimental population that shows the position of its known genes or genetic markers relative to each other in terms of recombination frequency, rather than a specific physical distance along each chromosome. Linkage maps were first developed by Alfred Sturtevant, a ...
In genetics, mapping functions are used to model the relationship between map distances (measured in map units or centimorgans) and recombination frequencies, particularly as these measurements relate to regions encompassed between genetic markers. One utility of this approach is that it allows one to obtain values for distances in genetic ...
In genetics, association mapping, also known as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage of historic linkage disequilibrium to link phenotypes (observable characteristics) to genotypes (the genetic constitution of organisms), uncovering genetic associations.
In genetics, a centimorgan (abbreviated cM) or map unit (m.u.) is a unit for measuring genetic linkage. It is defined as the distance between chromosome positions (also termed loci or markers) for which the expected average number of intervening chromosomal crossovers in a single generation is 0.01. It is often used to infer distance along a ...
The normalized linkage value can be between 1.0 and -1.0, with 1.0 meaning the linkage between the two is high, and below 1.0 the linkage gets lower. Combining each windows normalized linkage value into a chart or matrix allows for the genome to be mapped and analyzed using a heatmap or another graph. The co-segregation and normalized linkage ...
Linkage mapping can also be useful in determining the inheritance patterns of traits such as psychological disease. Linkage studies of panic disorder and anxiety disorders have indicated regions of interest on specific chromosomes. Chromosomes 4q21 and 7p are being considered strong candidate regions for panic and fear-associated anxiety ...
Genetic linkage describes the tendency of genes to be inherited together as a result of their location on the same chromosome. Linkage disequilibrium describes a situation in which some combinations of genes or genetic markers occur more or less frequently in a population than would be expected from their distances apart.