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The Variant Call Format or VCF is a standard text file format used in bioinformatics for storing gene sequence variations. The format was developed in 2010 for the 1000 Genomes Project and has since been used by other large-scale genotyping and DNA sequencing projects. [1][2] VCF is a common output format for variant calling programs due to its ...
Fugacity and BCF relate to each other in the following equation: = [6] where Z Fish is equal to the Fugacity capacity of a chemical in the fish, P Fish is equal to the density of the fish (mass/length 3), BCF is the partition coefficient between the fish and the water (length 3 /mass) and H is equal to the Henry's law constant (Length 2 /Time 2) [6]
The FAST4 format was invented as a derivative of the FASTQ format where each of the 4 bases (A,C,G,T) had separate probabilities stored. It was part of the Swift basecaller, an open source package for primary data analysis on next-gen sequence data "from images to basecalls". The FAST5 format was invented as an extension of the FAST4 format.
The BED (Browser Extensible Data) format is a text file format used to store genomic regions as coordinates and associated annotations. The data are presented in the form of columns separated by spaces or tabs. This format was developed during the Human Genome Project [1] and then adopted by other sequencing projects.
The BIM Collaboration Format (BCF) is a structured file format suited to issue tracking with a building information model. The BCF is designed primarily for defining views of a building model and associated information on collisions and errors connected with specific objects in the view. The BCF allows users of different BIM software, and/or ...
Boyce–Codd normal form. Not to be confused with Backus–Naur form. Boyce–Codd normal form (BCNF or 3.5NF) is a normal form used in database normalization. It is a slightly stricter version of the third normal form (3NF). By using BCNF, a database will remove all redundancies based on functional dependencies.
The Sumatra PDF Viewer is a tiny open source portable reader that opens PDF's in the blink of an eye. Bloat and startup time is a major drawback to Adobe Reader, so we fled to the faster arms of Foxit Reader long ago. However, at 850KB, Sumatra is way slimmer than FoxIt. ^ Anders Ingeman Rasmussen (2008).