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DBSCAN* [6] [7] is a variation that treats border points as noise, and this way achieves a fully deterministic result as well as a more consistent statistical interpretation of density-connected components. The quality of DBSCAN depends on the distance measure used in the function regionQuery(P,ε).
The R package "dbscan" includes a C++ implementation of OPTICS (with both traditional dbscan-like and ξ cluster extraction) using a k-d tree for index acceleration for Euclidean distance only. Python implementations of OPTICS are available in the PyClustering library and in scikit-learn. HDBSCAN* is available in the hdbscan library.
In anomaly detection, the local outlier factor (LOF) is an algorithm proposed by Markus M. Breunig, Hans-Peter Kriegel, Raymond T. Ng and Jörg Sander in 2000 for finding anomalous data points by measuring the local deviation of a given data point with respect to its neighbours.
scikit-learn (formerly scikits.learn and also known as sklearn) is a free and open-source machine learning library for the Python programming language. [3] It features various classification, regression and clustering algorithms including support-vector machines, random forests, gradient boosting, k-means and DBSCAN, and is designed to interoperate with the Python numerical and scientific ...
The mean of "glu" in the diabetes cases is 143.1 and the standard deviation is 31.26. The mean of "glu" in the non-diabetes cases is 110.0 and the standard deviation is 24.29. From this we see that, in this data set, diabetes cases are associated with greater levels of "glu". This will be made clearer by plots of the estimated density functions.
Kernel density estimation of 100 normally distributed random numbers using different smoothing bandwidths.. In statistics, kernel density estimation (KDE) is the application of kernel smoothing for probability density estimation, i.e., a non-parametric method to estimate the probability density function of a random variable based on kernels as weights.
Mean shift is a non-parametric feature-space mathematical analysis technique for locating the maxima of a density function, a so-called mode-seeking algorithm. [1] Application domains include cluster analysis in computer vision and image processing .
We employ the Matlab routine for 2-dimensional data. The routine is an automatic bandwidth selection method specifically designed for a second order Gaussian kernel. [14] The figure shows the joint density estimate that results from using the automatically selected bandwidth. Matlab script for the example