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In computer science, a suffix tree (also called PAT tree or, in an earlier form, position tree) is a compressed trie containing all the suffixes of the given text as their keys and positions in the text as their values. Suffix trees allow particularly fast implementations of many important string operations.
Trie representation of the string sets sea, sells, and she. Tries support various operations: insertion, deletion, and lookup of a string key. Tries are composed of nodes that contain links, which either point to other suffix child nodes or null. As for every tree, each node but the root is pointed to by only one other node, called its parent.
Generalized suffix tree for the strings "ABAB", "BABA" and "ABBA", numbered 0, 1 and 2. The longest common substrings of a set of strings can be found by building a generalized suffix tree for the strings, and then finding the deepest internal nodes which have leaf nodes from all the strings in the subtree below it. The figure on the right is ...
An alternative to building a generalized suffix tree is to concatenate the strings, and build a regular suffix tree or suffix array for the resulting string. When hits are evaluated after a search, global positions are mapped into documents and local positions with some algorithm and/or data structure, such as a binary search in the starting ...
An example of a radix tree. In computer science, a radix tree (also radix trie or compact prefix tree or compressed trie) is a data structure that represents a space-optimized trie (prefix tree) in which each node that is the only child is merged with its parent.
By its definition, a suffix automaton can be obtained via minimization of the suffix trie. It may be shown that a compacted suffix automaton is obtained by both minimization of the suffix tree (if one assumes each string on the edge of the suffix tree is a solid character from the alphabet) and compaction of the suffix automaton. [17]
A rope is a type of binary tree where each leaf (end node) holds a string of manageable size and length (also known as a weight), and each node further up the tree holds the sum of the lengths of all the leaves in its left subtree. A node with two children thus divides the whole string into two parts: the left subtree stores the first part of ...
Segment tree; Self-balancing binary search tree; Semantic resolution tree; Sentinel node; Sentinel value; Sibling node; Simplex tree; Split (phylogenetics) SPQR tree; Stern–Brocot tree; Suffix tree; Suffix tree clustering
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