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PAST includes functions for data management, data visualisation through graphics, univariate and multivariate analysis procedures as well as linear and non-linear modelling. There are also functions for diversity calculation, time series analysis, geostatistical and stratigraphic analysis.
CSI-BLAST (Context-Specific Iterated BLAST) is the context specific analog of PSI-BLAST (Position-Specific Iterated BLAST). Both of these programs are available as web-server and are available for free download.
A high-performance computing program for selecting the model of protein evolution that best fits a given set of aligned sequences: Maximum likelihood, AIC, BIC, DT: D. Darriba, GL. Taboada, R. Doallo, D. Posada PyCogent Software library for genomic biology
Distributed with the latest version of BLAST, this wrapper facilitates parallelization of the algorithm on modern hybrid architectures with many nodes and many cores within each node. [2] Protein: Burdyshaw CE, Sawyer S, Horton MD, Brook RG, Rekapalli B: 2017 CS-BLAST: Sequence-context specific BLAST, more sensitive than BLAST, FASTA, and SSEARCH.
Ploticus – software for generating a variety of graphs from raw data; PSPP – A free software alternative to IBM SPSS Statistics; R – free implementation of the S (programming language) Programming with Big Data in R (pbdR) – a series of R packages enhanced by SPMD parallelism for big data analysis; R Commander – GUI interface for R
Learn how to download and install or uninstall the Desktop Gold software and if your computer meets the system requirements.
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