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  2. Help : Referencing for beginners with citation templates

    en.wikipedia.org/wiki/Help:Referencing_for...

    The easiest way to start citing on Wikipedia is to see a basic example. The example here will show you how to cite a newspaper article using the {} template (see Citation quick reference for other types of citations). Copy and paste the following immediately after what you want to reference:

  3. SAMtools - Wikipedia

    en.wikipedia.org/wiki/SAMtools

    SAMtools provides the following commands, each invoked as "samtools some_command".view The view command filters SAM or BAM formatted data. Using options and arguments it understands what data to select (possibly all of it) and passes only that data through.

  4. Wikipedia:Citation templates - Wikipedia

    en.wikipedia.org/wiki/Wikipedia:Citation_templates

    For a citation to appear in a footnote, it needs to be enclosed in "ref" tags. You can add these by typing <ref> at the front of the citation and </ref> at the end. . Alternatively you may notice above the edit box there is a row of "markup" formatting buttons which include a <ref></ref> button to the right—if you highlight your whole citation and then click this markup button, it will ...

  5. SAM (file format) - Wikipedia

    en.wikipedia.org/wiki/SAM_(file_format)

    Sequence Alignment Map (SAM) is a text-based format originally for storing biological sequences aligned to a reference sequence developed by Heng Li and Bob Handsaker et al. [1] It was developed when the 1000 Genomes Project wanted to move away from the MAQ mapper format and decided to design a new format.

  6. Help:Referencing for beginners - Wikipedia

    en.wikipedia.org/wiki/Help:Referencing_for_beginners

    To use it, click on Cite at the top of the edit window, having already positioned your cursor after the sentence or fact you wish to reference. Then select one of the 'Templates' from the dropdown menu that best suits the type of source.

  7. Pileup format - Wikipedia

    en.wikipedia.org/wiki/Pileup_format

    Pileup format is a text-based format for summarizing the base calls of aligned reads to a reference sequence. This format facilitates visual display of SNP /indel calling and alignment. It was first used by Tony Cox and Zemin Ning at the Wellcome Trust Sanger Institute , and became widely known through its implementation within the SAMtools ...

  8. Wikipedia:Template index/Sources of articles/Citation quick ...

    en.wikipedia.org/.../Citation_quick_reference

    date: Full date of publication, in same format as main text of article. Or, use year. If you also have the day, use date instead. (optional) archive-url: URL of the archive location of the item, and archive-date: Date when the item was archived, in same format as main text of the article.

  9. Help:Citations quick reference - Wikipedia

    en.wikipedia.org/wiki/Help:Citations_quick_reference

    Help; Learn to edit; Community portal; Recent changes; Upload file; Special pages