Search results
Results from the WOW.Com Content Network
MG-RAST, an open-source web application server, facilitates automatic phylogenetic and functional analysis of metagenomes.It stands as one of the largest repositories for metagenomic data, employing the acronym for Metagenomic Rapid Annotations using Subsystems Technology (MG-RAST).
This strain displays a GC-content of 46.1% in a circular chromosome of 3.68 Mbp. 3,928 protein-coding sequences were identified, and 1,822 protein-coding sequences were appointed to one of the 457 RAST subsystems. [3] RAST, Rapid Annotation using Subsystem Technology, is a server that generates bacterial and archaeal genome annotations. [11]
MG-RAST Metagenomics Rapid Annotation using Subsystem Technology server; The New Science of Metagenomics: Revealing the Secrets of Our Microbial Planet A report released by the National Research Council in March 2007. Also, see the Report In Brief. Archived 2010-04-15 at the Wayback Machine
Gene annotations provide ... University of Chicago released the Metagenomics Rapid Annotation using Subsystem ... available for comparison within MG-RAST. Over 8,000 ...
Rapid Annotation via Subsystems Technology is a service that annotates archaeal and bacterial genomes and provides comparison of phylogenetic relationships across a phylogenetic tree. [7] Using RAST , Haloterrrigena turkmenica relatives were determined. [ 3 ]
To start a pangenomic analysis the first step is the homogenization of genome annotation. [23] The same software should be used to annotate all genomes used, such as GeneMark [53] or RAST. [54] In 2015, a group reviewed the different kinds of analyses and tools a researcher may have available. [55]
Halobacterium noricense is a halophilic, rod-shaped microorganism that thrives in environments with salt levels near saturation. [1] Despite the implication of the name, Halobacterium is actually a genus of archaea, not bacteria. [1]
The flagship website, the National Microbial Pathogen Data Resource provides curated annotations in an environment for comparative analysis of genomes and biological subsystems. In addition, the NMPDR team have also developed the Rapid Annotation using Subsystems Technology Server (RAST) for annotating and curating complete microbial genomes ...