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Free open source: ms-2.de: OpenMM: No No Yes Yes Yes Yes No Yes Yes High Performance MD, highly flexible, Python scriptable Free open source MIT: OpenMM: Orac: No No Yes Yes No Yes No Yes No Molecular dynamics simulation program to explore free energy surfaces in biomolecular systems at the atomic level Free open source: Orac download page ...
Satellite tobacco mosaic virus molecular graphics produced in VMD and rendered using Tachyon. The scene is shown with a combination molecular surfaces colored by a radial distance, and nucleic acids shown in ribbon representations. The Tachyon rendering uses both direct lighting and ambient occlusion lighting to improve the visibility of ...
National Center for Biotechnology Information: CP2K: Perform atomistic simulations of solid state, liquid, molecular and biological systems, written in Fortran 2003. Linux, macOS, Windows: GPL and LGPL: Free open source GNU GPLv2 or later EMBOSS: Suite of packages for sequencing, searching, etc. written in C: Linux, macOS, Unix, Windows [4] GPL ...
FlightGear-a free, open-source atmospheric and orbital flight simulator with a flight dynamics engine (JSBSim) that is used in a 2015 NASA benchmark [1] to judge new simulation code to space industry standards. FreeFem++ - Free, open-source, multiphysics Finite Element Analysis (FEA) software.
Alignment-free sequence analysis; De novo sequence assemblers; List of gene prediction software; List of disorder prediction software; List of Protein subcellular localization prediction tools; List of phylogenetics software; List of phylogenetic tree visualization software; Category:Metagenomics_software; Structural biology software
R is a programming language for statistical computing and data visualization.It has been adopted in the fields of data mining, bioinformatics and data analysis. [9]The core R language is augmented by a large number of extension packages, containing reusable code, documentation, and sample data.
Molecular graphics is the discipline and philosophy of studying molecules and their properties through graphical representation. [1] IUPAC limits the definition to representations on a "graphical display device". [ 2 ]
BioDigital is a New York-based biomedical visualization company that is often referred to as being "Google Earth for the Human Body". [1] [2] BioDigital offers an interactive, 3D software platform that enables individuals and businesses to explore and visualize health information. [3]
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