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  2. DESeq2 - Wikipedia

    en.wikipedia.org/wiki/DESeq2

    DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R. It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.

  3. Canonicalization - Wikipedia

    en.wikipedia.org/wiki/Canonicalization

    The document is encoded in UTF-8; Line breaks normalized to #xA on input, before parsing; Attribute values are normalized, as if by a validating processor; Character and parsed entity references are replaced; CDATA sections are replaced with their character content; The XML declaration and document type declaration are removed

  4. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.

  5. Text normalization - Wikipedia

    en.wikipedia.org/wiki/Text_normalization

    Text normalization is the process of transforming text into a single canonical form that it might not have had before. Normalizing text before storing or processing it allows for separation of concerns, since input is guaranteed to be consistent before operations are performed on it. Text normalization requires being aware of what type of text ...

  6. Database normalization - Wikipedia

    en.wikipedia.org/wiki/Database_normalization

    That means that, having data in unnormalized form (the least normalized) and aiming to achieve the highest level of normalization, the first step would be to ensure compliance to first normal form, the second step would be to ensure second normal form is satisfied, and so forth in order mentioned above, until the data conform to sixth normal form.

  7. Normal form (abstract rewriting) - Wikipedia

    en.wikipedia.org/wiki/Normal_form_(abstract...

    This leads to the idea of rewriting "modulo commutativity" where a term is in normal form if no rules but commutativity apply. [8] Weakly but not strongly normalizing rewrite system [9] The system {b → a, b → c, c → b, c → d} (pictured) is an example of a weakly normalizing but not strongly normalizing system.

  8. Sixth normal form - Wikipedia

    en.wikipedia.org/wiki/Sixth_normal_form

    The sixth normal form is currently as of 2009 being used in some data warehouses where the benefits outweigh the drawbacks, [9] for example using anchor modeling.Although using 6NF leads to an explosion of tables, modern databases can prune the tables from select queries (using a process called 'table elimination' - so that a query can be solved without even reading some of the tables that the ...

  9. Unicode equivalence - Wikipedia

    en.wikipedia.org/wiki/Unicode_equivalence

    Unicode equivalence is the specification by the Unicode character encoding standard that some sequences of code points represent essentially the same character. This feature was introduced in the standard to allow compatibility with pre-existing standard character sets, which often included similar or identical characters.