Search results
Results from the WOW.Com Content Network
Compressed Reference-oriented Alignment Map (CRAM) is a compressed columnar file format for storing biological sequences aligned to a reference sequence, initially devised by Markus Hsi-Yang Fritz et al. [1] CRAM was designed to be an efficient reference-based alternative to the Sequence Alignment Map (SAM) and Binary Alignment Map (BAM) file ...
Codon is a language with an ahead-of-time (AOT) compiler, that (AOT) compiles a statically-typed Python-like language with "syntax and semantics are nearly identical to Python's, there are some notable differences" [149] e.g. it uses 64-bit machine integers, for speed, not arbitrary like Python, and it claims speedups over CPython are usually ...
The precedence diagram method (PDM) is a tool for scheduling activities in a project plan. It is a method of constructing a project schedule network diagram that uses boxes, referred to as nodes, to represent activities and connects them with arrows that show the dependencies. It is also called the activity-on-node (AON) method.
For example, consider 9 contigs with the lengths 2,3,4,5,6,7,8,9, and 10; their sum is 54, half of the sum is 27, and the size of the genome also happens to be 54. Then, 50% of this assembly would be 10 + 9 + 8 = 27 (half the length of the sequence).
Example from MIL-HDBK-881, which illustrates the first three levels of a typical aircraft system [1] A work-breakdown structure (WBS) [2] in project management and systems engineering is a breakdown of a project into smaller components. It is a key project management element that organizes the team's work into manageable sections.
Example of a Structured Chart. [1] A structure chart (SC) in software engineering and organizational theory is a chart which shows the smallest of a system to its lowest manageable levels. [2] They are used in structured programming to arrange program modules into a tree. Each module is represented by a box, which contains the module's name.
A unique barcode sequence used on the cell hashing antibody can be designed to be different from an antibody barcode present on the ADTs used in CITE-seq. This makes it possible to couple cell hashing with CITE-seq on a single sequencing run. [12] Cell hashing allows super-loading of the scRNA-seq platform, resulting in a lower cost of sequencing.
The plot visualizes the differences between measurements taken in two samples, by transforming the data onto M (log ratio) and A (mean average) scales, then plotting these values. Though originally applied in the context of two channel DNA microarray gene expression data, MA plots are also used to visualise high-throughput sequencing analysis ...