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An MSA plate with Micrococcus sp. (1), Staphylococcus epidermidis (2) and S. aureus colonies (3). Mannitol salt agar or MSA is a commonly used selective and differential growth medium in microbiology. It encourages the growth of a group of certain bacteria while inhibiting the growth of others. [1]
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. [1] Their defining characteristic is that their cell envelope consists of a thin peptidoglycan cell wall sandwiched between an inner ( cytoplasmic ) membrane and an outer ...
Multiple sequence alignment (MSA) is the process or the result of sequence alignment of three or more biological sequences, generally protein, DNA, or RNA. These alignments are used to infer evolutionary relationships via phylogenetic analysis and can highlight homologous features between sequences.
Sealing of blunt DNA ends within a functional gene sequence occurs with a mutation frequency of about 50%. [18] NHEJ is the preferred pathway during stationary phase, and it protects M. smegmatis against the harmful effects of desiccation. [17] SSA is employed as a repair pathway when a double-strand break arises between direct repeat sequences ...
The transferred DNA (called T-DNA) is piloted to the plant cell nucleus by nuclear localization signals present in the Agrobacterium protein VirD2, which is covalently attached to the end of the T-DNA at the Right border (RB). Exactly how the T-DNA is integrated into the host plant genomic DNA is an active area of plant biology research.
The plasmid T-DNA that is transferred to the plant is an ideal vehicle for genetic engineering. [30] This is done by cloning a desired gene sequence into T-DNA binary vectors that will be used to deliver a sequence of interest into eukaryotic cells. This process has been performed using the firefly luciferase gene to produce glowing plants. [31]
On occasion, the medium in which the colonies grow can influence the screen and introduce false-positive results. [8] X-gal on the medium can occasionally degrade to produce a blue color or GFP can lose its fluorescence because of the medium and can impact researchers capabilities to determine colonies with the desire recombinant and those that ...
Microbes are ideally suited for biochemical and genetics studies and have made huge contributions to these fields of science such as the demonstration that DNA is the genetic material, [49] [50] that the gene has a simple linear structure, [51] that the genetic code is a triplet code, [52] and that gene expression is regulated by specific ...