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The root microbiome (also called rhizosphere microbiome) is the dynamic community of microorganisms associated with plant roots. [1] Because they are rich in a variety of carbon compounds, plant roots provide unique environments for a diverse assemblage of soil microorganisms, including bacteria, fungi, and archaea.
Rhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Rhizobium species form an endosymbiotic nitrogen-fixing association with roots of (primarily) legumes and other flowering plants. The bacteria colonize plant cells to form root nodules, where they convert atmospheric nitrogen into ammonia using the enzyme nitrogenase.
Symbiotic nitrogen-fixing bacteria, such as Rhizobium species, detect compounds like flavonoids secreted by the roots of leguminous plants and then produce nod factors that signal to the plant that they are present and will lead to the formation of root nodules. Bacteria are housed in symbiosomes in these nodules, where they are sustained by ...
Some bacteria produce intracellular nutrient storage ... Bacteria often function ... (a zone that includes the root surface and the soil that adheres to the root ...
Roots often function in storage of food and nutrients. The roots of most vascular plant species enter into symbiosis with certain fungi to form mycorrhizae, and a large range of other organisms including bacteria also closely associate with roots. [8] Large, mature tree roots above the soil
In some species (e.g. Cyclamen coum) roots come from the bottom of the tuber, suggesting that it is a stem tuber; in others (e.g. Cyclamen hederifolium) roots come largely from the top of the tuber, suggesting that it is a root tuber. [6] As an example of a combination, juno irises have both bulbs and storage roots. [7]
The rhizosphere is the thin area of soil immediately surrounding the root system. It is a densely populated area in which the roots compete with invading root systems of neighboring plant species for space, water, and mineral nutrients as well as form positive and negative relationships with soil-borne microorganisms such as bacteria, fungi and insects.
Root nodules are found on the roots of plants, primarily legumes, that form a symbiosis with nitrogen-fixing bacteria. [1] Under nitrogen -limiting conditions, capable plants form a symbiotic relationship with a host-specific strain of bacteria known as rhizobia . [ 2 ]