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  2. Lexical similarity - Wikipedia

    en.wikipedia.org/wiki/Lexical_similarity

    In linguistics, lexical similarity is a measure of the degree to which the word sets of two given languages are similar. A lexical similarity of 1 (or 100%) would mean a total overlap between vocabularies, whereas 0 means there are no common words. There are different ways to define the lexical similarity and the results vary accordingly.

  3. ROUGE (metric) - Wikipedia

    en.wikipedia.org/wiki/ROUGE_(metric)

    The metrics compare an automatically produced summary or translation against a reference or a set of references (human-produced) summary or translation. ROUGE metrics range between 0 and 1, with higher scores indicating higher similarity between the automatically produced summary and the reference.

  4. BLEU - Wikipedia

    en.wikipedia.org/wiki/BLEU

    BLEU (bilingual evaluation understudy) is an algorithm for evaluating the quality of text which has been machine-translated from one natural language to another. Quality is considered to be the correspondence between a machine's output and that of a human: "the closer a machine translation is to a professional human translation, the better it is" – this is the central idea behind BLEU.

  5. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    Software suite to search and cluster huge sequence sets. Similar sensitivity to BLAST and PSI-BLAST but orders of magnitude faster: Protein: Steinegger M, Mirdita M, Galiez C, Söding J [10] 2017 USEARCH Ultra-fast sequence analysis tool: Both: Edgar, R. C. (2010). "Search and clustering orders of magnitude faster than BLAST". Bioinformatics.

  6. BLOSUM - Wikipedia

    en.wikipedia.org/wiki/BLOSUM

    Scores for each position are obtained frequencies of substitutions in blocks of local alignments of protein sequences. [7] BLOSUM r The matrix built from blocks with less than r% of similarity E.g., BLOSUM62 is the matrix built using sequences with less than 62% similarity (sequences with ≥ 62% identity were clustered together).

  7. Jaro–Winkler distance - Wikipedia

    en.wikipedia.org/wiki/Jaro–Winkler_distance

    The higher the Jaro–Winkler distance for two strings is, the less similar the strings are. The score is normalized such that 0 means an exact match and 1 means there is no similarity. The original paper actually defined the metric in terms of similarity, so the distance is defined as the inversion of that value (distance = 1 − similarity).

  8. FASTA - Wikipedia

    en.wikipedia.org/wiki/FASTA

    Calculate a similarity score that is the sum of the joined regions penalising for each gap 20 points. This initial similarity score ( initn ) is used to rank the library sequences. The score of the single best initial region found in step 2 is reported ( init1 ).

  9. SimRank - Wikipedia

    en.wikipedia.org/wiki/SimRank

    SimRank is a general similarity measure, based on a simple and intuitive graph-theoretic model.SimRank is applicable in any domain with object-to-object relationships, that measures similarity of the structural context in which objects occur, based on their relationships with other objects.