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  2. Phylogenetic tree - Wikipedia

    en.wikipedia.org/wiki/Phylogenetic_tree

    The idea of a tree of life arose from ancient notions of a ladder-like progression from lower into higher forms of life (such as in the Great Chain of Being).Early representations of "branching" phylogenetic trees include a "paleontological chart" showing the geological relationships among plants and animals in the book Elementary Geology, by Edward Hitchcock (first edition: 1840).

  3. Phylogenetics - Wikipedia

    en.wikipedia.org/wiki/Phylogenetics

    A free computational phylogenetics package of programs for inferring evolutionary trees (phylogenies). One such example tree created by PHYLIP, called a "drawgram", generates rooted trees. This image shown in the figure below shows the evolution of phylogenetic trees over time. 1981 Majority consensus, Margush and MacMorris. [62]

  4. Tree of life (biology) - Wikipedia

    en.wikipedia.org/wiki/Tree_of_life_(biology)

    [15] Darwin's tree is not a tree of life, but rather a small portion created to show the principle of evolution. Because it shows relationships (phylogeny) and time (generations), it is a timetree. In contrast, Ernst Haeckel illustrated a phylogenetic tree (branching only) in 1866, not scaled to time, and of real species and higher taxa. In his ...

  5. Bayesian inference in phylogeny - Wikipedia

    en.wikipedia.org/wiki/Bayesian_inference_in...

    As shown by Felsenstein (1978), MP might be statistically inconsistent, [15] meaning that as more and more data (e.g. sequence length) is accumulated, results can converge on an incorrect tree and lead to long branch attraction, a phylogenetic phenomenon where taxa with long branches (numerous character state changes) tend to appear more ...

  6. Lineage (evolution) - Wikipedia

    en.wikipedia.org/wiki/Lineage_(evolution)

    Lineages are typically visualized as subsets of a phylogenetic tree. A lineage is a single line of descent or linear chain within the tree, while a clade is a (usually branched) monophyletic group, containing a single ancestor and all its descendants. [3] Phylogenetic trees are typically created from DNA, RNA or protein sequence data. Apart ...

  7. Phylogeography - Wikipedia

    en.wikipedia.org/wiki/Phylogeography

    The molecular trees are mapped in relation to paleogeographic history of the region for a complete phylogeographic study. The tree shown in the center of the figure has its branch lengths calibrated to a molecular clock, with the geological time bar shown at the bottom. The same phylogenetic tree is duplicated four more times to show where each ...

  8. Phylogenesis - Wikipedia

    en.wikipedia.org/wiki/Phylogenesis

    The result of these analyses is a phylogeny (also known as a phylogenetic tree) – a diagrammatic hypothesis about the history of the evolutionary relationships of a group of organisms. [6] Phylogenetic analyses have become central to understanding biodiversity, evolution, ecological genetics and genomes .

  9. Phylogenetic diversity - Wikipedia

    en.wikipedia.org/wiki/Phylogenetic_diversity

    Phylogenetic diversity is a measure of biodiversity which incorporates phylogenetic difference between species. It is defined and calculated as "the sum of the lengths of all those branches that are members of the corresponding minimum spanning path ", [ 1 ] in which 'branch' is a segment of a cladogram , and the minimum spanning path is the ...

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