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  2. Gillespie algorithm - Wikipedia

    en.wikipedia.org/wiki/Gillespie_algorithm

    In contrast, the Gillespie algorithm allows a discrete and stochastic simulation of a system with few reactants because every reaction is explicitly simulated. A trajectory corresponding to a single Gillespie simulation represents an exact sample from the probability mass function that is the solution of the master equation.

  3. CHARMM - Wikipedia

    en.wikipedia.org/wiki/CHARMM

    Some force fields may be combined, for example CHARMM22 and CHARMM27 for the simulation of protein-DNA binding. Also, parameters for NAD+, sugars, fluorinated compounds, etc., may be downloaded. These force field version numbers refer to the CHARMM version where they first appeared, but may of course be used with subsequent versions of the ...

  4. Centrifugal force - Wikipedia

    en.wikipedia.org/wiki/Centrifugal_force

    Centrifugal force is a fictitious force in Newtonian mechanics (also called an "inertial" or "pseudo" force) that appears to act on all objects when viewed in a rotating frame of reference. It appears to be directed radially away from the axis of rotation of the frame.

  5. Fictitious force - Wikipedia

    en.wikipedia.org/wiki/Fictitious_force

    An example of a pseudo force as defined by Iro is the Coriolis force, maybe better to be called: the Coriolis effect. [4] [5] [6] The gravitational force would also be a fictitious force (pseudo force) in a field model in which particles distort spacetime due to their mass, such as in the theory of general relativity.

  6. Centrifugal pseudo-force - Wikipedia

    en.wikipedia.org/?title=Centrifugal_pseudo-force&...

    Centrifugal pseudo-force. Add languages. Add links. Article; ... Download as PDF; Printable version ... Appearance. move to sidebar hide. From Wikipedia, the free ...

  7. Biosimulation - Wikipedia

    en.wikipedia.org/wiki/Biosimulation

    Biosimulation is becoming increasingly important for drug development. [1] Since on average only 11% of all drug candidates are approved, [2] it is anticipated that biosimulation may be the tool to predict whether a candidate drug will fail in the development process e.g. in clinical trials due to adverse side effects, bad pharmacokinetics or even toxicity.

  8. Curve fitting - Wikipedia

    en.wikipedia.org/wiki/Curve_fitting

    Fitting of a noisy curve by an asymmetrical peak model, with an iterative process (Gauss–Newton algorithm with variable damping factor α).Curve fitting [1] [2] is the process of constructing a curve, or mathematical function, that has the best fit to a series of data points, [3] possibly subject to constraints.

  9. Virtual Cell - Wikipedia

    en.wikipedia.org/wiki/Virtual_Cell

    The results can be displayed on-line, or they can be downloaded to the user's computer in a wide variety of export formats. The Virtual Cell license allows free access to all members of the scientific community. [6] Users may save their models in the VCell DataBase, which is maintained on servers at U. Connecticut.