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  2. DESeq2 - Wikipedia

    en.wikipedia.org/wiki/DESeq2

    DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R. It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.

  3. Normal form (abstract rewriting) - Wikipedia

    en.wikipedia.org/wiki/Normal_form_(abstract...

    An abstract rewriting system is strongly normalizing, terminating, noetherian, or has the (strong) normalization property (SN), if each of its objects is strongly normalizing. [ 2 ] A rewriting system has the normal form property (NF) if for all objects a and normal forms b , b can be reached from a by a series of rewrites and inverse rewrites ...

  4. Canonicalization - Wikipedia

    en.wikipedia.org/wiki/Canonicalization

    In morphology and lexicography, a lemma is the canonical form of a set of words. In English, for example, run, runs, ran, and running are forms of the same lexeme, so we can select one of them; ex. run, to represent all the forms. Lexical databases such as Unitex use this kind of representation.

  5. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.

  6. Normalization (statistics) - Wikipedia

    en.wikipedia.org/wiki/Normalization_(statistics)

    Normalizing moments, using the standard deviation as a measure of scale. Coefficient of variation: Normalizing dispersion, using the mean as a measure of scale, particularly for positive distribution such as the exponential distribution and Poisson distribution.

  7. List of mass spectrometry software - Wikipedia

    en.wikipedia.org/wiki/List_of_mass_spectrometry...

    pyOpenMS is an open-source Python library for mass spectrometry, specifically for the analysis of proteomics and metabolomics data in Python. Peaksel Proprietary: This web-based (available both in cloud as SaaS and as on-prem installation) software for LC/MS data processing supports batch processing and high-throughput experiments.

  8. Multiple inheritance - Wikipedia

    en.wikipedia.org/wiki/Multiple_inheritance

    C++ does not support explicit repeated inheritance since there would be no way to qualify which superclass to use (i.e. having a class appear more than once in a single derivation list [class Dog : public Animal, Animal]). C++ also allows a single instance of the multiple class to be created via the virtual inheritance mechanism (i.e. Worker ...

  9. Second normal form - Wikipedia

    en.wikipedia.org/wiki/Second_normal_form

    Second normal form (2NF), in database normalization, is a normal form. A relation is in the second normal form if it fulfills the following two requirements: It is in first normal form. It does not have any non-prime attribute that is functionally dependent on any proper subset of any candidate key of the relation (i.e. it lacks partial ...