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  2. PROSITE - Wikipedia

    en.wikipedia.org/wiki/PROSITE

    PROSITE is a protein database. [1] [2] It consists of entries describing the protein families, domains and functional sites as well as amino acid patterns and profiles in them.. These are manually curated by a team of the Swiss Institute of Bioinformatics and tightly integrated into Swiss-Prot protein annotati

  3. Protein Information Resource - Wikipedia

    en.wikipedia.org/wiki/Protein_Information_Resource

    In 2002, PIR – along with its international partners, the European Bioinformatics Institute and the Swiss Institute of Bioinformatics – were awarded a grant from NIH to create UniProt, a single worldwide database of protein sequence and function, by unifying the Protein Information Resource-Protein Sequence Database, Swiss-Prot, and TrEMBL ...

  4. UniProt - Wikipedia

    en.wikipedia.org/wiki/UniProt

    UniProt Archive (UniParc) is a comprehensive and non-redundant database, which contains all the protein sequences from the main, publicly available protein sequence databases. [17] Proteins may exist in several different source databases, and in multiple copies in the same database.

  5. Expasy - Wikipedia

    en.wikipedia.org/wiki/Expasy

    Logo Expasy 2020. Expasy is an online bioinformatics resource operated by the SIB Swiss Institute of Bioinformatics.It is an extensible and integrative portal which provides access to over 160 databases and software tools and supports a range of life science and clinical research areas, from genomics, proteomics and structural biology, to evolution and phylogeny, systems biology and medical ...

  6. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    Swiss-Prot has collected over 81 000 variants in roughly 13,000 human protein sequence records from peer-reviewed literature. It is unclear how many unique proteins types are present in the database. Signal transduction pathway databases

  7. Sequence database - Wikipedia

    en.wikipedia.org/wiki/Sequence_database

    The UniProt database is an example of a protein sequence database. As of 2013 it contained over 40 million sequences and is growing at an exponential rate. [ 1 ] Historically, sequences were published in paper form, but as the number of sequences grew, this storage method became unsustainable.

  8. Protein structure database - Wikipedia

    en.wikipedia.org/wiki/Protein_structure_database

    a protein databases that includes visuals of protein structure. Also, includes protein pathways and gene sequences including other tools. SCOP the Structural Classification of Proteins a detailed and comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known. SWISS-MODEL Repository

  9. List of protein subcellular localization prediction tools

    en.wikipedia.org/wiki/List_of_protein_sub...

    With BAR 3.0 and a sequence you can annotate when possible: function (Gene Ontology), structure (Protein Data Bank), protein domains (Pfam). Also if your sequence falls into a cluster with a structural/some structural template/s we provide an alignment towards the template/templates based on the Cluster-HMM (HMM profile) that allows you to ...