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  2. F-statistics - Wikipedia

    en.wikipedia.org/wiki/F-statistics

    The measures F IS, F ST, and F IT are related to the amounts of heterozygosity at various levels of population structure. Together, they are called F-statistics, and are derived from F, the inbreeding coefficient. In a simple two-allele system with inbreeding, the genotypic frequencies are:

  3. Infinite sites model - Wikipedia

    en.wikipedia.org/wiki/Infinite_sites_model

    Using allele frequencies, it allows for the calculation of heterozygosity, or genetic diversity, in a finite population and for the estimation of genetic distances between populations of interest. The assumptions of the ISM are that (1) there are an infinite number of sites where mutations can occur, (2) every new mutation occurs at a novel ...

  4. Zygosity - Wikipedia

    en.wikipedia.org/wiki/Zygosity

    Heterozygosity values of 51 worldwide human populations. [10] Sub-Saharan Africans have the highest values in the world. In population genetics, the concept of heterozygosity is commonly extended to refer to the population as a whole, i.e., the fraction of individuals in a population that are heterozygous for a particular locus. It can also ...

  5. Nucleotide diversity - Wikipedia

    en.wikipedia.org/wiki/Nucleotide_diversity

    It is usually associated with other statistical measures of population diversity, and is similar to expected heterozygosity. This statistic may be used to monitor diversity within or between ecological populations, to examine the genetic variation in crops and related species, [ 3 ] or to determine evolutionary relationships.

  6. Effective population size - Wikipedia

    en.wikipedia.org/wiki/Effective_population_size

    The effective population size (N e) is the size of an idealised population that would experience the same rate of genetic drift as the real population. [1] Idealised populations are those following simple one-locus models that comply with assumptions of the neutral theory of molecular evolution.

  7. Coalescent theory - Wikipedia

    en.wikipedia.org/wiki/Coalescent_theory

    Mean heterozygosity is calculated as the probability of a mutation occurring at a given generation divided by the probability of any "event" at that generation (either a mutation or a coalescence). The probability that the event is a mutation is the probability of a mutation in either of the two lineages: 2 μ {\displaystyle 2\mu } .

  8. Test cross - Wikipedia

    en.wikipedia.org/wiki/Test_cross

    The first uses of test crosses were in Gregor Mendel’s experiments in plant hybridization.While studying the inheritance of dominant and recessive traits in pea plants, he explains that the “signification” (now termed zygosity) of an individual for a dominant trait is determined by the expression patterns of the following generation.

  9. Nested set model - Wikipedia

    en.wikipedia.org/wiki/Nested_set_model

    The nested set model is a technique for representing nested set collections (also known as trees or hierarchies) in relational databases.. It is based on Nested Intervals, that "are immune to hierarchy reorganization problem, and allow answering ancestor path hierarchical queries algorithmically — without accessing the stored hierarchy relation".