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  2. Microarray analysis techniques - Wikipedia

    en.wikipedia.org/wiki/Microarray_analysis_techniques

    Example of an approximately 40,000 probe spotted oligo microarray with enlarged inset to show detail. Microarray analysis techniques are used in interpreting the data generated from experiments on DNA (Gene chip analysis), RNA, and protein microarrays, which allow researchers to investigate the expression state of a large number of genes – in many cases, an organism's entire genome – in a ...

  3. DNA microarray - Wikipedia

    en.wikipedia.org/wiki/DNA_microarray

    How to use a microarray for genotyping. The video shows the process of extracting genotypes from a human spit sample using microarrays. Genotyping is a major use of DNA microarrays, but with some modifications they can also be used for other purposes such as measurement of gene expression and epigenetic markers.

  4. Microarray databases - Wikipedia

    en.wikipedia.org/wiki/Microarray_databases

    A microarray database is a repository containing microarray gene expression data. The key uses of a microarray database are to store the measurement data, manage a searchable index, and make the data available to other applications for analysis and interpretation (either directly, or via user downloads). Microarray databases can fall into two ...

  5. Gene expression profiling - Wikipedia

    en.wikipedia.org/wiki/Gene_expression_profiling

    Different from the analysis on differentially expressed individual genes, another type of analysis focuses on differential expression or perturbation of pre-defined gene sets and is called gene set analysis. [16] [17] Gene set analysis demonstrated several major advantages over individual gene differential expression analysis.

  6. Microarray - Wikipedia

    en.wikipedia.org/wiki/Microarray

    A microarray is a multiplex lab-on-a-chip. [1] Its purpose is to simultaneously detect the expression of thousands of biological interactions. It is a two-dimensional array on a solid substrate—usually a glass slide or silicon thin-film cell—that assays (tests) large amounts of biological material using high-throughput screening miniaturized, multiplexed and parallel processing and ...

  7. Transcriptomics technologies - Wikipedia

    en.wikipedia.org/wiki/Transcriptomics_technologies

    Transcriptomics method use over time. Published papers referring to RNA-Seq (black), RNA microarray (red), expressed sequence tag (blue), digital differential display (green), and serial/cap analysis of gene expression (yellow) since 1990.

  8. MA plot - Wikipedia

    en.wikipedia.org/wiki/MA_plot

    Within computational biology, an MA plot is an application of a Bland–Altman plot for visual representation of genomic data. The plot visualizes the differences between measurements taken in two samples, by transforming the data onto M (log ratio) and A (mean average) scales, then plotting these values.

  9. Genetic analysis - Wikipedia

    en.wikipedia.org/wiki/Genetic_analysis

    A DNA microarray is a collection of microscopic DNA spots attached to a solid surface. Scientists use DNA microarrays to measure the expression levels of large numbers of genes simultaneously or to genotype multiple regions of a genome. When a gene is expressed in a cell, it generates messenger RNA (mRNA). Overexpressed genes generate more mRNA ...

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