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The Balanophoraceae plastid code (not shown on web) [4] [5] The Cephalodiscidae mitochondrial code; The Enterosoma code [3] The Peptacetobacter code [3] The Anaerococcus and Onthovivens code [3] The Absconditabacterales code [3] The alternative translation tables (2 to 37) involve codon reassignments that are recapitulated in the DNA and RNA ...
The two base-pair complementary chains of the DNA molecule allow replication of the genetic instructions. The "specific pairing" is a key feature of the Watson and Crick model of DNA, the pairing of nucleotide subunits. [5] In DNA, the amount of guanine is equal to cytosine and the amount of adenine is equal to thymine. The A:T and C:G pairs ...
Most high-throughput, next generation sequencing platforms produce shorter read lengths compared to Sanger sequencing.These new platforms are able to generate large quantities of data in short periods of time, but until methods were developed for de novo assembly of large genomes from short read sequences, Sanger sequencing remained the standard method of creating a reference genome. [10]
DNA is read by DNA polymerase in the 3′ to 5′ direction, meaning the new strand is synthesized in the 5' to 3' direction. Since the leading and lagging strand templates are oriented in opposite directions at the replication fork, a major issue is how to achieve synthesis of new lagging strand DNA, whose direction of synthesis is opposite to ...
The Staden Package was developed by Rodger Staden's group at the Medical Research Council (MRC) Laboratory of Molecular Biology, Cambridge, England, since 1977. [2] [3] [4] The package was available free to academic users, with 2,500 licenses issued in 2003 and an estimated 10,000 users, when funding for further development ended. [5]
The command symexp dup,1G4A,(1G4A),5.0 generates copies of the 1G4A structure that pass within 5 angstroms of the original and names them dup01000000, dup02000000, etc. The chosen cutoff must be large enough to generate at least one complete molecule, which will probably also generate extraneous fragments of related molecules.
SAMtools is a set of utilities for interacting with and post-processing short DNA sequence read alignments in the SAM (Sequence Alignment/Map), BAM (Binary Alignment/Map) and CRAM formats, written by Heng Li.
RNA polymerase synthesizes the new RNA in the 5' to 3' direction by adding complementary bases to the 3' end of a new strand. [3] The holoenzyme composition dissociates after transcription initiation, where the σ factor disengages the complex and the RNA polymerase, in its core form, slides along the DNA molecule. [1]