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With standard S N 1 reaction conditions the reaction outcome is retention via a competing S N i mechanism and not racemization and with pyridine added the result is again inversion. [5] [3] S N i reaction mechanism Sn1 occurs in tertiary carbon while Sn2 occurs in primary carbon
General reaction scheme for the S N 1 reaction. The leaving group is denoted "X", and the nucleophile is denoted "Nu–H". The unimolecular nucleophilic substitution (S N 1) reaction is a substitution reaction in organic chemistry.
A more detailed explanation of this can be found in the main SN1 reaction page. S N 2 reaction mechanism. The S N 2 mechanism has just one step. The attack of the reagent and the expulsion of the leaving group happen simultaneously. This mechanism always results in inversion of configuration.
Sigmatropic rearrangements are concisely described by an order term [i,j], which is defined as the migration of a σ-bond adjacent to one or more π systems to a new position (i−1) and (j−1) atoms removed from the original location of the σ-bond. [3]
In particular, antarafacial topology corresponds to inversion of configuration for the carbon atom of a [1, n]-sigmatropic rearrangement, and conrotation for electrocyclic ring closure, while suprafacial corresponds to retention and disrotation.
Walden inversion is the inversion of a stereogenic center in a chiral molecule in a chemical reaction. Since a molecule can form two enantiomers around a stereogenic center, the Walden inversion converts the configuration of the molecule from one enantiomeric form to the other.
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AP site reactivity. AP sites are extremely reactive. They fluctuate between a furanose ring and an open-chain free aldehyde and free alcohol conformation. Exposure to a nucleophile can cause a β-elimination reaction, wherein the 3' phosphoester bond is broken, causing a single-stranded break. This reaction can be catalyzed by AP lyase. [2]