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Package repositories are generally specific to the distribution of Linux the bioinformatician is using. A number of Linux variants are prevalent in bioinformatics work. Fedora is a freely-distributed version of the commercial Red Hat system. Red Hat is widely used in the corporate world as they offer commercial support and training packages.
Linux, macOS, Unix, Windows: 3-Clause BSD License: Open Chemistry Project: BEDtools "Genome arithmetic"—manipulation of coordinate sets and the extraction of sequences from a BED file. Linux: MIT: QuinlanLab, University of Utah: Bioclipse: Visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP) Linux ...
CloudBioLinux is an open-source project providing machine images for bioinformatics on cloud computing platforms. [1] CloudBioLinux provides a build and deployment system which can deploy directly to desktop machines, to desktop Virtual Machines (VMs), or to cloud providers such as the Amazon Elastic Compute Cloud (EC2).
CLC bio's main activities were in software development for desktop (Mac OS X, Windows, and Linux), enterprise, and cloud software for analysis of biological data.CLC bio developed some of their own open source algorithms, as well as their own SIMD-accelerated implementations of several existing popular applications.
The most popular PowerPC emulation tools for Mac OS/Mac OS X are Microsoft's Virtual PC, and the open-source QEMU. [8] Linux dual-booting is achieved by partitioning the boot drive, installing the Yaboot bootloader onto the Linux partition, and selecting that Linux partition as the Startup Disk. This results in users being prompted to select ...
MkLinux (for Microkernel Linux) is an open-source software computer operating system begun by the Open Software Foundation Research Institute [1] and Apple Computer [2] in February 1996, to port Linux to the PowerPC platform, and Macintosh computers. The name refers to the Linux kernel being adapted to run as a server hosted on the Mach ...
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coreboot, formerly known as LinuxBIOS, [5] is a software project aimed at replacing proprietary firmware (BIOS or UEFI) found in most computers with a lightweight firmware designed to perform only the minimum number of tasks necessary to load and run a modern 32-bit or 64-bit operating system.