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PSPP contains k-means, The QUICK CLUSTER command performs k-means clustering on the dataset. R contains three k-means variations. SciPy and scikit-learn contain multiple k-means implementations. Spark MLlib implements a distributed k-means algorithm. Torch contains an unsup package that provides k-means clustering. Weka contains k-means and x ...
In statistics and data mining, X-means clustering is a variation of k-means clustering that refines cluster assignments by repeatedly attempting subdivision, and keeping the best resulting splits, until a criterion such as the Akaike information criterion (AIC) or Bayesian information criterion (BIC) is reached. [5]
In data mining, k-means++ [1] [2] is an algorithm for choosing the initial values (or "seeds") for the k-means clustering algorithm. It was proposed in 2007 by David Arthur and Sergei Vassilvitskii, as an approximation algorithm for the NP-hard k-means problem—a way of avoiding the sometimes poor clusterings found by the standard k-means algorithm.
Variations of k-means often include such optimizations as choosing the best of multiple runs, but also restricting the centroids to members of the data set (k-medoids), choosing medians (k-medians clustering), choosing the initial centers less randomly (k-means++) or allowing a fuzzy cluster assignment (fuzzy c-means).
Another method that modifies the k-means algorithm for automatically choosing the optimal number of clusters is the G-means algorithm. It was developed from the hypothesis that a subset of the data follows a Gaussian distribution. Thus, k is increased until each k-means center's data is Gaussian. This algorithm only requires the standard ...
Similar to other clustering evaluation metrics such as Silhouette score, the CH index can be used to find the optimal number of clusters k in algorithms like k-means, where the value of k is not known a priori. This can be done by following these steps: Perform clustering for different values of k. Compute the CH index for each clustering result.
Fuzzy clustering (also referred to as soft clustering or soft k-means) is a form of clustering in which each data point can belong to more than one cluster.. Clustering or cluster analysis involves assigning data points to clusters such that items in the same cluster are as similar as possible, while items belonging to different clusters are as dissimilar as possible.
K-means clustering algorithm and some of its variants (including k-medoids) have been shown to produce good results for gene expression data (at least better than hierarchical clustering methods). Empirical comparisons of k-means, k-medoids, hierarchical methods and, different distance measures can be found in the literature. [18] [19]