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Gut microbiota, gut microbiome, or gut flora are the microorganisms, including bacteria, archaea, fungi, and viruses, that live in the digestive tracts of animals. [ 1 ] [ 2 ] The gastrointestinal metagenome is the aggregate of all the genomes of the gut microbiota .
Bacteroides thetaiotaomicron is a common bacterium in the human gut microbiome that has evolved alongside humans to support digestion and general health. Over time, this bacterium developed the ability to break down complex carbohydrates into simple sugars, which helps the host species get more energy from the food it eats.
The bacteria and fungi live together in the gut and there is most likely a competition for nutrient sources present. [99] [100] Seelbinder et al. found that commensal bacteria in the gut regulate the growth and pathogenicity of Candida albicans by their metabolites, particularly by propionate, acetic acid and 5-dodecenoate. [98]
Microbial metabolism is the means by which a microbe obtains the energy and nutrients (e.g. carbon) it needs to live and reproduce.Microbes use many different types of metabolic strategies and species can often be differentiated from each other based on metabolic characteristics.
A significant quantity of the cellulose humans consume is not metabolized by gut microbes and therefore cannot be considered a MAC. [2] The amount of dietary MACs found within a food source will differ for each individual, since which carbohydrates are metabolized depends upon the composition of each person's microbiota.
Human microbiota are microorganisms (bacteria, viruses, fungi and archaea) found in a specific environment. They can be found in the stomach, intestines, skin, genitals and other parts of the body. [1] Various body parts have diverse microorganisms. Some microbes are specific to certain body parts and others are associated with many microbiomes.
Putrefying bacteria play a key role in decomposing and fermenting substances within the body as well as the body itself after death. Putrefaction is defined as the final step of decomposition after death. [3] Because these bacteria play a role in decomposition after death, putrefying bacteria also play a key role in the nitrogen cycle.
A recent report found temperature plays a major role in the amount of time the bacteria will persist in the environment, the life span increases with colder temperatures (0–4 °C). [23] "A new study has found that there is a three-way relationship between a type of gut bacteria, cortisol, and brain metabolites.