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There are several ways to classify which feature of the microbiome will be used in a MWAS. MWAS can be assessed using a specific taxonomic level (species, genus, [8] phyla, etc.), operational taxonomic unit (OTU) [1] or amplicon sequence variant (ASV), transcriptome, [9] proteome, [10] and more. The approach used depends upon the research ...
Modern microbial ecology was launched by Robert Hungate and coworkers, who investigated the rumen ecosystem. The study of the rumen required Hungate to develop techniques for culturing anaerobic microbes, and he also pioneered a quantitative approach to the study of microbes and their ecological activities that differentiated the relative ...
These examples demonstrate the importance of microbial symbioses for the functioning of ocean ecosystems. Understanding symbioses with this same level of detail in the context of complex communities (i.e., whole microbiomes) remains ripe for exploration and, indeed, requires a more integrated framework from the fields of microbiology ...
A 2016 paper by Brent Stephens [7] highlights some of the key findings of studies of "microbiomes of the indoor environment". These key findings include those listed below: "Culture-independent methods reveal vastly greater microbial diversity compared to culture-based methods" "Indoor spaces often harbor unique microbial communities"
The hydrothermal vent microbial community includes all unicellular organisms that live and reproduce in a chemically distinct area around hydrothermal vents. These include organisms in the microbial mat , free floating cells, or bacteria in an endosymbiotic relationship with animals.
The EMP aims to process as many as 200,000 samples in different biomes, generating a complete database of microbes on earth to characterize environments and ecosystems by microbial composition and interaction. Using these data, new ecological and evolutionary theories can be proposed and tested. [87]
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These include the buccal region (especially cavities in the gingiva), rumen, caecum etc. of mammalian herbivores or even invertebrate digestive tracts.In the case of mammalian gastrointestinal microecology, microorganisms such as protozoa, bacteria, as well as curious incompletely defined organisms (such as certain large structurally complex Selenomonads, Quinella ovalis "Quin's Oval ...