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  2. Molecular configuration - Wikipedia

    en.wikipedia.org/wiki/Molecular_configuration

    The molecular configuration of a molecule is the permanent geometry that results from the spatial arrangement of its bonds. [1] The ability of the same set of atoms to form two or more molecules with different configurations is stereoisomerism. This is distinct from constitutional isomerism which arises from atoms being connected in a different ...

  3. Rotamer - Wikipedia

    en.wikipedia.org/wiki/Rotamer

    The gauche conformation on the right is a conformer, while the eclipsed conformation on the left is a transition state between conformers. Above: Newman projection; below: depiction of spatial orientation. In chemistry, rotamers are chemical species that differ from one another primarily due to rotations about one or more single bonds.

  4. Configuration entropy - Wikipedia

    en.wikipedia.org/wiki/Configuration_entropy

    In statistical mechanics, configuration entropy is the portion of a system's entropy that is related to discrete representative positions of its constituent particles. For example, it may refer to the number of ways that atoms or molecules pack together in a mixture, alloy or glass, the number of conformations of a molecule, or the number of spin configurations in a magnet.

  5. Absolute configuration - Wikipedia

    en.wikipedia.org/wiki/Absolute_configuration

    In chemistry, absolute configuration refers to the spatial arrangement of atoms within a molecular entity (or group) that is chiral, and its resultant stereochemical description. [1] Absolute configuration is typically relevant in organic molecules where carbon is bonded to four different substituents .

  6. Ring flip - Wikipedia

    en.wikipedia.org/wiki/Ring_flip

    The term, "flip" is misleading, because the direction of each carbon remains the same; what changes is the orientation. A conformation is a unique structural arrangement of atoms, in particular one achieved through the rotation of single bonds. [2] A conformer is a conformational isomer, a blend of the two words.

  7. Conformational change - Wikipedia

    en.wikipedia.org/wiki/Conformational_change

    Its shape can change in response to changes in its environment or other factors; each possible shape is called a conformation, and a transition between them is called a conformational change. Factors that may induce such changes include temperature, pH , voltage , light in chromophores , concentration of ions , phosphorylation , or the binding ...

  8. Eclipsed conformation - Wikipedia

    en.wikipedia.org/wiki/Eclipsed_conformation

    In chemistry an eclipsed conformation is a conformation in which two substituents X and Y on adjacent atoms A, B are in closest proximity, implying that the torsion angle X–A–B–Y is 0°. [1] Such a conformation can exist in any open chain, single chemical bond connecting two sp 3 - hybridised atoms, and it is normally a conformational ...

  9. Walsh diagram - Wikipedia

    en.wikipedia.org/wiki/Walsh_diagram

    In the following example, the Lewis acidity of AH 3 molecules such as BH 3 and CH 3 + is predicted. Six electron AH 3 molecules should have a planar conformation. It can be seen that the HOMO, 1e’, of planar AH 3 is destabilized upon bending of the A-H bonds to form a pyramid shape, due to disruption of bonding.