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Maximum subarray problems arise in many fields, such as genomic sequence analysis and computer vision.. Genomic sequence analysis employs maximum subarray algorithms to identify important biological segments of protein sequences that have unusual properties, by assigning scores to points within the sequence that are positive when a motif to be recognized is present, and negative when it is not ...
A longest common subsequence (LCS) is the longest subsequence common to all sequences in a set of sequences (often just two sequences). It differs from the longest common substring : unlike substrings, subsequences are not required to occupy consecutive positions within the original sequences.
The longest common subsequence of sequences 1 and 2 is: LCS (SEQ 1,SEQ 2) = CGTTCGGCTATGCTTCTACTTATTCTA. This can be illustrated by highlighting the 27 elements of the longest common subsequence into the initial sequences: SEQ 1 = A CG G T G TCG T GCTATGCT GA T G CT G ACTTAT A T G CTA SEQ 2 = CGTTCGGCTAT C G TA C G TTCTA TT CT A T G ATT T CTA A
This subsequence has length six; the input sequence has no seven-member increasing subsequences. The longest increasing subsequence in this example is not the only solution: for instance, 0, 4, 6, 9, 11, 15 0, 2, 6, 9, 13, 15 0, 4, 6, 9, 13, 15. are other increasing subsequences of equal length in the same input sequence.
There is an optimization version of the partition problem, which is to partition the multiset S into two subsets S 1, S 2 such that the difference between the sum of elements in S 1 and the sum of elements in S 2 is minimized. The optimization version is NP-hard, but can be solved efficiently in practice. [4]
This is a problem closely related to the longest common subsequence problem. Given two sequences X = < x 1,...,x m > and Y = < y 1,...,y n >, a sequence U = < u 1,...,u k > is a common supersequence of X and Y if items can be removed from U to produce X and Y. A shortest common supersequence (SCS) is a common supersequence of minimal length.
The subset sum problem (SSP) is a decision problem in computer science.In its most general formulation, there is a multiset of integers and a target-sum , and the question is to decide whether any subset of the integers sum to precisely . [1]
An algorithm is fundamentally a set of rules or defined procedures that is typically designed and used to solve a specific problem or a broad set of problems.. Broadly, algorithms define process(es), sets of rules, or methodologies that are to be followed in calculations, data processing, data mining, pattern recognition, automated reasoning or other problem-solving operations.