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  2. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    Proprietary, free academic use, source code Beckman Institute: NWChem: No No Yes Yes No No Yes No No High-performance computational chemistry software, includes quantum mechanics, molecular dynamics and combined QM-MM methods Free open source, Educational Community License version 2.0 NWChem: Protein Local Optimization Program: No Yes Yes Yes ...

  3. Annealing by short circuit - Wikipedia

    en.wikipedia.org/wiki/Annealing_by_short_circuit

    This temperature is affected by the rotational speed of the pulleys, the ambient temperature, and the voltage applied. Where t {\displaystyle t} is the temperature of the wire, K {\displaystyle K} is a constant, V {\displaystyle V} is the voltage applied, r {\displaystyle r} is the number of rotations of the pulleys per minute, and t a ...

  4. Simulated annealing - Wikipedia

    en.wikipedia.org/wiki/Simulated_annealing

    In the process, the call neighbour(s) should generate a randomly chosen neighbour of a given state s; the call random(0, 1) should pick and return a value in the range [0, 1], uniformly at random. The annealing schedule is defined by the call temperature( r ) , which should yield the temperature to use, given the fraction r of the time budget ...

  5. Adaptive simulated annealing - Wikipedia

    en.wikipedia.org/wiki/Adaptive_simulated_annealing

    Adaptive simulated annealing (ASA) is a variant of simulated annealing (SA) algorithm in which the algorithm parameters that control temperature schedule and random step selection are automatically adjusted according to algorithm progress. This makes the algorithm more efficient and less sensitive to user defined parameters than canonical SA.

  6. In silico PCR - Wikipedia

    en.wikipedia.org/wiki/In_silico_PCR

    It is fast (through use of a genome's FM-index) and can account for primer melting temperature and tolerated edit distances between primers and hit locations on the genome. VPCR [ 3 ] runs a dynamic simulation of multiplex PCR, allowing for an estimate of quantitative competition effects between multiple amplicons in one reaction.

  7. Annealing temperature - Wikipedia

    en.wikipedia.org/wiki/Annealing_temperature

    Download QR code; Print/export Download as PDF; ... move to sidebar hide. Annealing temperature may refer to: Annealing (glass) Annealing (metallurgy) ...

  8. Furnace anneal - Wikipedia

    en.wikipedia.org/wiki/Furnace_anneal

    During ion implantation process, the crystal substrate is damaged due to bombardment with high energy ions. The damage caused can be repaired by subjecting the crystal to high temperature. This process is called annealing. Furnace anneals may be integrated into other furnace processing steps, such as oxidations, or may be processed on their own.

  9. Heat treating - Wikipedia

    en.wikipedia.org/wiki/Heat_treating

    Annealing is most often used to soften a metal for cold working, to improve machinability, or to enhance properties like electrical conductivity. In ferrous alloys, annealing is usually accomplished by heating the metal beyond the upper critical temperature and then cooling very slowly, resulting in the formation of pearlite. In both pure ...

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