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In mathematics, a Euclidean distance matrix is an n×n matrix representing the spacing of a set of n points in Euclidean space. For points x 1 , x 2 , … , x n {\displaystyle x_{1},x_{2},\ldots ,x_{n}} in k -dimensional space ℝ k , the elements of their Euclidean distance matrix A are given by squares of distances between them.
In general, a distance matrix is a weighted adjacency matrix of some graph. In a network, a directed graph with weights assigned to the arcs, the distance between two nodes of the network can be defined as the minimum of the sums of the weights on the shortest paths joining the two nodes (where the number of steps in the path is bounded). [2]
A power diagram is a type of Voronoi diagram defined from a set of circles using the power distance; it can also be thought of as a weighted Voronoi diagram in which a weight defined from the radius of each circle is added to the squared Euclidean distance from the circle's center. [15]
It can be extended to infinite-dimensional vector spaces as the L 2 norm or L 2 distance. [25] The Euclidean distance gives Euclidean space the structure of a topological space, the Euclidean topology, with the open balls (subsets of points at less than a given distance from a given point) as its neighborhoods. [26]
In order to make all of this mathematically precise, the theory must clearly define what is a Euclidean space, and the related notions of distance, angle, translation, and rotation. Even when used in physical theories, Euclidean space is an abstraction detached from actual physical locations, specific reference frames , measurement instruments ...
Lloyd's algorithm is usually used in a Euclidean space. The Euclidean distance plays two roles in the algorithm: it is used to define the Voronoi cells, but it also corresponds to the choice of the centroid as the representative point of each cell, since the centroid is the point that minimizes the average squared Euclidean distance to the ...
It is possible to make the spatial weight matrix a function of 'distance class': [7] where denotes the 'distance class', for example =,,, … corresponding to first, second, third etc. neighbors. In this case, functions of the spatial weight matrix become distance class dependent.
In a similar manner, the geodesic distance matrix in Isomap can be viewed as a kernel matrix. The doubly centered geodesic distance matrix K in Isomap is of the form = where =:= is the elementwise square of the geodesic distance matrix D = [D ij], H is the centering matrix, given by =, = [ …