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PSI Protein Classifier is a program generalizing the results of both successive and independent iterations of the PSI-BLAST program. PSI Protein Classifier determines belonging of the found by PSI-BLAST proteins to the known families. The unclassified proteins are grouped according to similarity.
The open-source software MMseqs is an alternative to BLAST/PSI-BLAST, which improves on current search tools over the full range of speed-sensitivity trade-off, achieving sensitivities better than PSI-BLAST at more than 400 times its speed. [27]
PSI-blast based secondary structure PREDiction (PSIPRED) is a method used to investigate protein structure. It uses artificial neural network machine learning methods in its algorithm. [ 2 ] [ 3 ] [ 4 ] It is a server-side program, featuring a website serving as a front-end interface, which can predict a protein's secondary structure ( beta ...
Disaster creeps closer to her home. 'My house is unsellable': This Pennsylvania woman bought cheap land from the state for $15,000 — but didn't know a previous owner sold it due to a landslide ...
A 5 psi blast overpressure will rupture eardrums in about 1% of subjects, and a 45 psi overpressure will cause eardrum rupture in about 99% of all subjects. The threshold for lung damage occurs at about 15 psi blast overpressure. A 35-45 psi overpressure may cause 1% fatalities, and 55 to 65 psi overpressure may cause 99% fatalities. [3]
CS-BLAST greatly improves alignment quality over the entire range of sequence identities and especially for difficult alignments in comparison to regular BLAST and PSI-BLAST. PSI-BLAST (Position-Specific Iterated BLAST) runs at about the same speed per iteration as regular BLAST, but is able to detect weaker sequence similarities that are still ...
BLAST (biotechnology), Basic Local Alignment Search Tool, an algorithm used in bioinformatics; Blast cell or precursor cell, in cytology, a type of partially differentiated, usually unipotent cell; Blast disease, a disease of cereal crops; Blast injury, a complex type of physical trauma resulting from direct or indirect exposure to an explosion
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