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  2. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Apache Software Foundation, myGrid: Ascalaph Designer: Computer program for general purpose molecular modelling for molecular design and simulations. Windows: GPLv2: Agile Molecule AutoDock: Suite of automated docking tools Linux, Mac OS X, SGI IRIX, and Windows: GPL: Scripps Research: Avogadro

  3. Paleontological Statistics - Wikipedia

    en.wikipedia.org/wiki/Paleontological_Statistics

    PAST includes functions for data management, data visualisation through graphics, univariate and multivariate analysis procedures as well as linear and non-linear modelling. There are also functions for diversity calculation, time series analysis, geostatistical and stratigraphic analysis.

  4. List of gene prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_gene_prediction...

    This is a list of software tools and ... and dynamic programming based ab initio gene prediction program [6] ... MZEF, GENEMARK, GENEFINDER, FGENE, BLAST, POLYAH ...

  5. List of phylogenetics software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetics_software

    A high-performance computing program for selecting the model of protein evolution that best fits a given set of aligned sequences: Maximum likelihood, AIC, BIC, DT: D. Darriba, GL. Taboada, R. Doallo, D. Posada PyCogent Software library for genomic biology

  6. List of statistical software - Wikipedia

    en.wikipedia.org/wiki/List_of_statistical_software

    Ploticus – software for generating a variety of graphs from raw data; PSPP – A free software alternative to IBM SPSS Statistics; R – free implementation of the S (programming language) Programming with Big Data in R (pbdR) – a series of R packages enhanced by SPMD parallelism for big data analysis; R Commander – GUI interface for R

  7. BLAST (biotechnology) - Wikipedia

    en.wikipedia.org/wiki/BLAST_(biotechnology)

    In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.

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