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Apache Software Foundation, myGrid: Ascalaph Designer: Computer program for general purpose molecular modelling for molecular design and simulations. Windows: GPLv2: Agile Molecule AutoDock: Suite of automated docking tools Linux, Mac OS X, SGI IRIX, and Windows: GPL: Scripps Research: Avogadro
PAST includes functions for data management, data visualisation through graphics, univariate and multivariate analysis procedures as well as linear and non-linear modelling. There are also functions for diversity calculation, time series analysis, geostatistical and stratigraphic analysis.
This is a list of software tools and ... and dynamic programming based ab initio gene prediction program [6] ... MZEF, GENEMARK, GENEFINDER, FGENE, BLAST, POLYAH ...
A high-performance computing program for selecting the model of protein evolution that best fits a given set of aligned sequences: Maximum likelihood, AIC, BIC, DT: D. Darriba, GL. Taboada, R. Doallo, D. Posada PyCogent Software library for genomic biology
Ploticus – software for generating a variety of graphs from raw data; PSPP – A free software alternative to IBM SPSS Statistics; R – free implementation of the S (programming language) Programming with Big Data in R (pbdR) – a series of R packages enhanced by SPMD parallelism for big data analysis; R Commander – GUI interface for R
In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.
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