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2. List of protein structure prediction software - Wikipedia

   en.wikipedia.org/wiki/List_of_protein_structure...

   Energy calculations and protein design: Downloadable program Phyre, Phyre2 Remote template detection, alignment, 3D modeling, multi-templates, ab initio: Webserver with job manager, automatically updated fold library, genome searching and other facilities HHpred: Template detection, alignment, 3D modeling: Interactive webserver with help ...

3. List of alignment visualization software - Wikipedia

   en.wikipedia.org/wiki/List_of_alignment...

   This page is a subsection of the list of sequence alignment software. Multiple alignment visualization tools typically serve four purposes: Aid general understanding of large-scale DNA or protein alignments; Visualize alignments for figures and publication; Manually edit and curate automatically generated alignments; Analysis in depth

4. UGENE - Wikipedia

   en.wikipedia.org/wiki/UGENE

   UGENE Workflow Designer allows creating and running complex computational workflow schemas. [21] The distinguishing feature of Workflow Designer, relative to other bioinformatics workflow management systems is that workflows are executed on a local computer. It helps to avoid data transfer issues, whereas other tools’ reliance on remote file ...

5. List of sequence alignment software - Wikipedia

   en.wikipedia.org/wiki/List_of_sequence_alignment...

   Low power consumption is useful for datacentre equipment. Predictable runtime. Better price/performance than software sliding window aligners on current hardware, but not better than software BWT-based aligners currently. Can manage large numbers (>2) of mismatches. Will find all hit positions for all seeds.

6. Alibre Design - Wikipedia

   en.wikipedia.org/wiki/Alibre_Design

   Alibre Design is a 3D parametric computer aided design software suite developed by Alibre for Microsoft Windows. Available in fifteen languages. Available in fifteen languages. Alibre is a brand of Alibre, LLC, a company based in Texas .

7. SolveSpace - Wikipedia

   en.wikipedia.org/wiki/SolveSpace

   SolveSpace is a free and open-source 2D/3D constraint-based parametric computer-aided design (CAD) software that supports basic 2D and 3D constructive solid geometry modeling. It is a constraint-based parametric modeler with simple mechanical simulation capabilities. Version 2.1 and onward runs on Windows, Linux and macOS.