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  2. Restriction enzyme - Wikipedia

    en.wikipedia.org/wiki/Restriction_enzyme

    Type IIM restriction endonucleases, such as DpnI, are able to recognize and cut methylated DNA. [29] [41] [42] Type IIS restriction endonucleases (e.g. FokI) cleave DNA at a defined distance from their non-palindromic asymmetric recognition sites; [29] this characteristic is widely used to perform in-vitro cloning techniques such as Golden Gate ...

  3. Endonuclease - Wikipedia

    en.wikipedia.org/wiki/Endonuclease

    The commonly used notation for restriction endonucleases [6] is of the form "VwxyZ", where "Vwx" are, in italics, the first letter of the genus and the first two letters of the species where this restriction endonuclease may be found, for example, Escherichia coli, Eco, and Haemophilus influenzae, Hin.

  4. List of restriction enzyme cutting sites - Wikipedia

    en.wikipedia.org/wiki/List_of_restriction_enzyme...

    A restriction enzyme or restriction endonuclease is a special type of biological macromolecule that functions as part of the "immune system" in bacteria.One special kind of restriction enzymes is the class of "homing endonucleases", these being present in all three domains of life, although their function seems to be very different from one domain to another.

  5. List of restriction enzyme cutting sites: A - Wikipedia

    en.wikipedia.org/wiki/List_of_restriction_enzyme...

    Name of Restriction Enzyme: Accepted name of the molecule, according to the internationally adopted nomenclature, [1] [2] and bibliographical references. Note: When alphabetizing, enzymes are first ordered alphabetically by the acronyms (everything before the roman numeral); then enzymes of a given acronym are ordered alphabetically by the ...

  6. Restriction modification system - Wikipedia

    en.wikipedia.org/wiki/Restriction_modification...

    The restriction modification system (RM system) is found in bacteria and archaea, and provides a defense against foreign DNA, such as that borne by bacteriophages.. Bacteria have restriction enzymes, also called restriction endonucleases, which cleave double-stranded DNA at specific points into fragments, which are then degraded further by other endonucleases.

  7. List of homing endonuclease cutting sites - Wikipedia

    en.wikipedia.org/wiki/List_of_homing_endo...

    Databases and lists of restriction enzymes: Very comprehensive database of restriction enzymes supported by New England Biolabs. It includes all kind of biological, structural, kinetical and commercial information about thousands of enzymes. Also includes related literature for every molecule: Roberts RJ, Vincze T, Posfai J, Macelis D. "REBASE"

  8. Sticky and blunt ends - Wikipedia

    en.wikipedia.org/wiki/Sticky_and_blunt_ends

    Here is an example of an A-overhang: 5'-ATCTGACTA-3' 3'-TAGACTGA-5' Longer overhangs are called cohesive ends or sticky ends. [3] They are most often created by restriction endonucleases when they cut DNA. Very often they cut the two DNA strands four base pairs from each other, creating a four-base 3' overhang in one molecule and a ...

  9. Nuclease - Wikipedia

    en.wikipedia.org/wiki/Nuclease

    Not all restriction endonucleases cut symmetrically and leave blunt ends like HindII described above. Many endonucleases cleave the DNA backbones in positions that are not directly opposite each other, creating overhangs. For example, the nuclease EcoRI has the recognition sequence 5'—GAATTC—3'.