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  2. Scientists who used AI to ‘crack the code’ of almost all ...

    www.aol.com/news/scientists-used-ai-crack-code...

    Their AI program – the AlphaFold Protein Structure Database – has been used by at least 2 million researchers around the world. It acts as a “Google search” for protein structures ...

  3. Predicted Aligned Error - Wikipedia

    en.wikipedia.org/wiki/Predicted_Aligned_Error

    Download QR code ; Print/export ... is a quantitative output produced by AlphaFold, a protein structure prediction ... Users can download the raw PAE data for all ...

  4. AlphaFold - Wikipedia

    en.wikipedia.org/wiki/AlphaFold

    The AlphaFold Protein Structure Database, a joint project between AlphaFold and EMBL-EBI, was launched on July 22, 2021. At launch, the database contained AlphaFold-predicted models for nearly the complete UniProt proteome of humans and 20 model organisms , totaling over 365,000 proteins.

  5. Structural bioinformatics - Wikipedia

    en.wikipedia.org/wiki/Structural_bioinformatics

    The Protein Data Bank (PDB) is a database of 3D structure data for large biological molecules, such as proteins, DNA, and RNA. PDB is managed by an international organization called the Worldwide Protein Data Bank , which is composed of several local organizations, as. PDBe, PDBj, RCSB, and BMRB.

  6. Google DeepMind CEO wins joint Nobel Prize in chemistry for ...

    www.aol.com/google-deepmind-ceo-wins-joint...

    The Nobel committee praised the recipients for cracking "the code for proteins' amazing structures," highlighting Hassabis and Jumper's achievement of developing "an AI model to solve a 50-year ...

  7. Threading (protein sequence) - Wikipedia

    en.wikipedia.org/wiki/Threading_(protein_sequence)

    Protein threading treats the template in an alignment as a structure, and both sequence and structure information extracted from the alignment are used for prediction. When there is no significant homology found, protein threading can make a prediction based on the structure information.

  8. List of protein subcellular localization prediction tools

    en.wikipedia.org/wiki/List_of_protein_sub...

    With BAR 3.0 and a sequence you can annotate when possible: function (Gene Ontology), structure (Protein Data Bank), protein domains (Pfam). Also if your sequence falls into a cluster with a structural/some structural template/s we provide an alignment towards the template/templates based on the Cluster-HMM (HMM profile) that allows you to ...

  9. De novo protein structure prediction - Wikipedia

    en.wikipedia.org/wiki/De_novo_protein_structure...

    Currently, the gap between known protein sequences and confirmed protein structures is immense. At the beginning of 2008, only about 1% of the sequences listed in the UniProtKB database corresponded to structures in the Protein Data Bank (PDB), leaving a gap between sequence and structure of approximately five million. [4]