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  2. Exon - Wikipedia

    en.wikipedia.org/wiki/Exon

    Across all eukaryotic genes in GenBank, there were (in 2002), on average, 5.48 exons per protein coding gene. The average exon encoded 30-36 amino acids. [7] While the longest exon in the human genome is 11555 bp long, several exons have been found to be only 2 bp long. [8] A single-nucleotide exon has been reported from the Arabidopsis genome. [9]

  3. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    fastq-trim is very fast and memory-efficient tool written in C, following object-oriented design and strict code-quality practices. It runs in a fraction of the time of most popular trimming tools, while using only a few megabytes of RAM. It can be easily extended to support additional alignment algorithms.

  4. Group I catalytic intron - Wikipedia

    en.wikipedia.org/wiki/Group_I_catalytic_intron

    Splicing of group I introns is processed by two sequential transesterification reactions. [3] First an exogenous guanosine or guanosine nucleotide (exoG) docks onto the active G-binding site located in P7, and then its 3'-OH is aligned to attack the phosphodiester bond at the "upstream" (closer to the 5' end) splice site located in P1, resulting in a free 3'-OH group at the upstream exon and ...

  5. Intron - Wikipedia

    en.wikipedia.org/wiki/Intron

    The word intron is derived from the term intragenic region, i.e., a region inside a gene. [1] The term intron refers to both the DNA sequence within a gene and the corresponding RNA sequence in RNA transcripts. [2] The non-intron sequences that become joined by this RNA processing to form the mature RNA are called exons. [3]

  6. Exitron - Wikipedia

    en.wikipedia.org/wiki/Exitron

    The same sequence within a pre mRNA strand can be considered an intron or exon depending on the desired protein to be produced. As a result, different final mRNA sequences are generated and a large variety of proteins can be made from one single gene. [ 1 ]

  7. RNA splicing - Wikipedia

    en.wikipedia.org/wiki/RNA_splicing

    This results in a mature messenger RNA with a missing section of an exon. In this way, a point mutation, which might otherwise affect only a single amino acid, can manifest as a deletion or truncation in the final protein. [citation needed] Intron Exon Boundary in pre-mRNA 1 - 3' Splice site 2 - Poly pyrimidine Tract 3 - Branch site 4 - 5 ...

  8. Exon trapping - Wikipedia

    en.wikipedia.org/wiki/Exon_trapping

    The genomic fragment is inserted into the intron of a 'splicing vector' consisting of a known exon - intron - exon sequence of DNA, and the vector is then inserted into an eukaryotic cell. If the fragment does not contain exons (i.e., consists solely of intron DNA), it will be spliced out together with the vector's original intron.

  9. Exon shuffling - Wikipedia

    en.wikipedia.org/wiki/Exon_shuffling

    Exon shuffling is a molecular mechanism for the formation of new genes. It is a process through which two or more exons from different genes can be brought together ectopically , or the same exon can be duplicated , to create a new exon-intron structure. [ 1 ]