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  2. dbSNP - Wikipedia

    en.wikipedia.org/wiki/DbSNP

    a) Various sources submit data, and each variation is assigned a unique submitted SNP number ID (ss#). b) dbSNP compiles identical ss# records into one reference SNP cluster (rs#) containing data from each ss#. c) Users can retrieve data for specific rs# records and analyze these variations. d) Data from dbSNP aids clinical and applied research.

  3. Haplogroup R-Z18 - Wikipedia

    en.wikipedia.org/wiki/Haplogroup_R-Z18

    Z18 was discovered during Phase 3 of the 1000 Genomes Project [2] and entered on 16 August 2014 into the SNP database dbSNP at the National Center for Biotechnology Information as reference SNP cluster report rs767290651. [3]

  4. Arachidonate 5-lipoxygenase - Wikipedia

    en.wikipedia.org/wiki/Arachidonate_5-lipoxygenase

    n/a Ensembl n/a n/a UniProt n a n/a RefSeq (mRNA) n/a n/a RefSeq (protein) n/a n/a Location (UCSC) n/a n/a PubMed search n/a n/a Wikidata View/Edit Human arachidonate 5-lipoxygenase Identifiers EC no. 1.13.11.34 CAS no. 80619-02-9 [permanent dead link ‍] Databases IntEnz IntEnz view BRENDA BRENDA entry ExPASy NiceZyme view KEGG KEGG entry MetaCyc metabolic pathway PRIAM profile PDB ...

  5. Minor allele frequency - Wikipedia

    en.wikipedia.org/wiki/Minor_allele_frequency

    1. Introduce the reference of a SNP of interest, as an example: rs429358, in a database (dbSNP or other). 2. Find MAF/MinorAlleleCount link. MAF/MinorAlleleCount: C=0.1506/754 (1000 Genomes, where number of genomes sampled = N = 2504); [4] where C is the minor allele for that particular locus; 0.1506 is the frequency of the C allele (MAF), i.e. 15% within the 1000 Genomes database; and 754 is ...

  6. SNP annotation - Wikipedia

    en.wikipedia.org/wiki/SNP_annotation

    Single nucleotide polymorphism annotation (SNP annotation) is the process of predicting the effect or function of an individual SNP using SNP annotation tools. In SNP annotation the biological information is extracted, collected and displayed in a clear form amenable to query.

  7. SNP array - Wikipedia

    en.wikipedia.org/wiki/SNP_array

    In molecular biology, SNP array is a type of DNA microarray which is used to detect polymorphisms within a population. A single nucleotide polymorphism (SNP), a variation at a single site in DNA , is the most frequent type of variation in the genome.

  8. Genotyping by sequencing - Wikipedia

    en.wikipedia.org/wiki/Genotyping_by_sequencing

    In the field of genetic sequencing, genotyping by sequencing, also called GBS, is a method to discover single nucleotide polymorphisms (SNP) in order to perform genotyping studies, such as genome-wide association studies . [1] GBS uses restriction enzymes to reduce genome complexity and genotype multiple DNA samples. [2]

  9. rs6265 - Wikipedia

    en.wikipedia.org/wiki/Rs6265

    A number of studies have examined the role of this polymorphism in risk of neuropsychiatric disorders [1], including schizophrenia [2] and depression. [3] It is generally thought that some variants of the polymorphism lead to memory impairment and susceptibility to neuropsychiatric disorders, [4] and a 2007 meta-analysis of case-control studies found a relationship between the SNP and ...