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Karyotype visualisation in Ensembl Genomes. The key feature of Ensembl Genomes is its graphical interface, which allows users to scroll through a genome and observe the relative location of features such as conceptual annotation (e.g. genes, SNP loci), sequence patterns (e.g. repeats) and experimental data (e.g. sequences and external sequence features mapped onto the genome). [1]
Ensembl genome database project is a scientific project at the European Bioinformatics Institute, which provides a centralized resource for geneticists, molecular biologists and other researchers studying the genomes of our own species and other vertebrates and model organisms.
Ensembl: provides automatic annotation databases for human, mouse, other vertebrate and eukaryote genomes; Ensembl Genomes: provides genome-scale data for bacteria, protists, fungi, plants and invertebrate metazoa, through a unified set of interactive and programmatic interfaces (using the Ensembl software platform)
Based at the EMBL-EBI, the Ensembl [11] is a database organized around genomic data, maintained by the Ensembl Project. Tasked with the continuous annotation of the genomes of model organisms, Ensembl provides researchers a comprehensive resource of relevant biological information about each specific genome. The annotation of the stored ...
PhytoPath is built from 32nd release (Aug 2016) of Ensembl Genomes and version 4.2 of PHI-base PhytoPath was a joint scientific project between the European Bioinformatics Institute and Rothamsted Research , running from January 2012 [ 1 ] to May 30, 2017. [ 2 ]
This page was last edited on 7 September 2021, at 10:24 (UTC).; Text is available under the Creative Commons Attribution-ShareAlike 4.0 License; additional terms may apply.
UCSC Browser: This site contains the reference sequence and working draft assemblies for a large collection of genomes. [60] Ensembl: The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. [61]
PHI-base has been aligned with Ensembl Genomes since 2011, FungiDB since 2016, and Global Biotic Interactions (GloBI) since 2018. [11] All new PHI-base releases are integrated by these independent databases. PHI-base is a resource for many applications including: