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  2. RNA-Seq - Wikipedia

    en.wikipedia.org/wiki/RNA-Seq

    Therefore, the total number of reads generated in a single experiment is typically normalized by converting counts to fragments, reads, or counts per million mapped reads (FPM, RPM, or CPM). The difference between RPM and FPM was historically derived during the evolution from single-end sequencing of fragments to paired-end sequencing.

  3. REEP5 - Wikipedia

    en.wikipedia.org/wiki/REEP5

    REEP5 is expressed across a number of tissues at a relatively high level, with at least 20 Reads Per Kilobase of transcript, per Million mapped reads appearing in adrenal, fat, gall bladder, heart, kidney, prostate, lung, and urinary bladder tissues. [14] Expression is even more highly elevated in brain and thyroid tissues. [14]

  4. Coverage (genetics) - Wikipedia

    en.wikipedia.org/wiki/Coverage_(genetics)

    Sequence coverage (or depth) is the number of unique reads that include a given nucleotide in the reconstructed sequence. [1] [2] Deep sequencing refers to the general concept of aiming for high number of unique reads of each region of a sequence. [3] Physical coverage, the cumulative length of reads or read pairs expressed as a multiple of ...

  5. Read (biology) - Wikipedia

    en.wikipedia.org/wiki/Read_(biology)

    Sequencing technologies vary in the length of reads produced. Reads of length 20-40 base pairs (bp) are referred to as ultra-short. [2] Typical sequencers produce read lengths in the range of 100-500 bp. [3] However, Pacific Biosciences platforms produce read lengths of approximately 1500 bp. [4] Read length is a factor which can affect the results of biological studies. [5]

  6. SRD5A1 - Wikipedia

    en.wikipedia.org/wiki/SRD5A1

    SRD5A1 gene expression in human tissues, sorted by fragments per kilobase of exon model per million reads mapped (FPKM). [18] The FPKM data is taken from a 2014 study. [19] In humans, the protein isozyme encoded by the SRD5A1 gene is expressed in esophagus, liver, skin and 24 other tissues. [20] [19]

  7. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    It is already adapted to align long reads (third-generation sequencing technologies) and can reach speeds of 45 million paired reads per hour per processor. [49] Subjunc [44] is a specialized version of Subread. It uses all mappable regions in an RNA-seq read to discover exons and exon-exon junctions.

  8. 6 of the Most Common Home Renovations — Are They Worth It ...

    www.aol.com/finance/6-most-common-home...

    With home prices still on the rise in every region of the U.S., 63% of homeowners say they'd rather remodel their homes than move to renovated homes, according to an October survey by Clever Real...

  9. Massive parallel sequencing - Wikipedia

    en.wikipedia.org/wiki/Massive_parallel_sequencing

    While single-read accuracy is 87%, consensus accuracy has been demonstrated at 99.999% with multi-kilobase read lengths. [ 37 ] [ 38 ] In 2015, Pacific Biosciences released a new sequencing instrument called the Sequel System, which increases capacity approximately 6.5-fold.