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The root microbiome (also called rhizosphere microbiome) is the dynamic community of microorganisms associated with plant roots. [1] Because they are rich in a variety of carbon compounds, plant roots provide unique environments for a diverse assemblage of soil microorganisms, including bacteria, fungi, and archaea.
The nitrogen-fixing clade consists of four orders of flowering plants: Cucurbitales, Fabales, Fagales and Rosales. [a] This subgroup of the rosids encompasses 28 families of trees, shrubs, vines and herbaceous perennials and annuals. The roots of many of the species host bacteria that fix nitrogen into compounds the plants can use. [4] [5]
The most notable examples are plant root-arbuscular mycorrhizal (AM) and legume-rhizobial symbioses, both of which greatly influence the ability of roots to uptake various nutrients from the soil. Some of these microbes cannot survive in the absence of the plant host ( obligate symbionts include viruses and some bacteria and fungi), which ...
Additionally, loosely associated plant bacteria, termed endophytes, have been reported to fix nitrogen in planta. [50] These bacteria colonize the intercellular spaces of leaves, stems, and roots in plants [51] but do not form specialized structures like rhizobia and Frankia.
Rhizobacteria are root-associated bacteria that can have a detrimental (parasitic varieties), neutral or beneficial effect on plant growth. The name comes from the Greek rhiza, meaning root. The term usually refers to bacteria that form symbiotic relationships with many plants . Rhizobacteria are often referred to as plant growth-promoting ...
Rhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Rhizobium species form an endosymbiotic nitrogen-fixing association with roots of (primarily) legumes and other flowering plants. The bacteria colonize plant cells to form root nodules, where they convert atmospheric nitrogen into ammonia using the enzyme nitrogenase.
Root nodules are found on the roots of plants, primarily legumes, that form a symbiosis with nitrogen-fixing bacteria. [1] Under nitrogen -limiting conditions, capable plants form a symbiotic relationship with a host-specific strain of bacteria known as rhizobia . [ 2 ]
Endophytes are micro-organisms living within the tissue of a plant as endosymbionts, without causing symptoms of disease.Some of them are mutualistic symbionts with beneficial effects on their host, such as improved growth or resistance against disease or environmental stress, and are being used as microbial inoculants.