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  2. Newman projection - Wikipedia

    en.wikipedia.org/wiki/Newman_projection

    A Newman projection is a drawing that helps visualize the 3-dimensional structure of a molecule. [1] This projection most commonly sights down a carbon-carbon bond, making it a very useful way to visualize the stereochemistry of alkanes.

  3. Rotamer - Wikipedia

    en.wikipedia.org/wiki/Rotamer

    Above: Newman projection; below: depiction of spatial orientation. In chemistry, rotamers are chemical species that differ from one another primarily due to rotations about one or more single bonds. Various arrangements of atoms in a molecule that differ by rotation about single bonds can also be referred to as different conformations ...

  4. Backbone-dependent rotamer library - Wikipedia

    en.wikipedia.org/wiki/Backbone-dependent_rotamer...

    Steric interactions that affect the backbone-conformation-dependent rotamer preferences of amino acid side chains, shown in a Newman projection. The effect of backbone conformation on side-chain rotamer frequencies is primarily due to steric repulsions between backbone atoms whose position is dependent on φ and ψ and the side-chain γ heavy atoms (carbon, oxygen, or sulfur) of each residue ...

  5. Anti-periplanar - Wikipedia

    en.wikipedia.org/wiki/Anti-periplanar

    Figure 5 shows 2-chloro-2,3-dimethylbutane in a sawhorse projection with chlorine and a hydrogen anti-periplanar to each other. Syn-periplanar or synperiplanar is similar to anti-periplanar. In the syn-periplanar conformer, the A and D are on the same side of the plane of the bond, with the dihedral angle of A−B and C−D between +30° and ...

  6. Dihedral angle - Wikipedia

    en.wikipedia.org/wiki/Dihedral_angle

    sawhorse projection Free energy diagram of n -butane as a function of dihedral angle. In stereochemistry , a torsion angle is defined as a particular example of a dihedral angle, describing the geometric relation of two parts of a molecule joined by a chemical bond .

  7. Skeletal formula - Wikipedia

    en.wikipedia.org/wiki/Skeletal_formula

    The skeletal formula of the antidepressant drug escitalopram, featuring skeletal representations of heteroatoms, a triple bond, phenyl groups and stereochemistry. The skeletal formula, line-angle formula, bond-line formula or shorthand formula of an organic compound is a type of molecular structural formula that serves as a shorthand representation of a molecule's bonding and some details of ...

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  9. Staggered conformation - Wikipedia

    en.wikipedia.org/wiki/Staggered_conformation

    Staggered conformation image right in Newman projection Eclipsed conformation. In organic chemistry, a staggered conformation is a chemical conformation of an ethane-like moiety abcX–Ydef in which the substituents a, b, and c are at the maximum distance from d, e, and f; this requires the torsion angles to be 60°. [1]