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  2. Protein pKa calculations - Wikipedia

    en.wikipedia.org/wiki/Protein_pKa_calculations

    The pK a values of an amino acid side chain in solution is typically inferred from the pK a values of model compounds (compounds that are similar to the side chains of amino acids). See Amino acid for the pK a values of all amino acid side chains inferred in such a way. There are also numerous experimental studies that have yielded such values ...

  3. Amino acid - Wikipedia

    en.wikipedia.org/wiki/Amino_acid

    3.1 Table of standard amino acid abbreviations and properties. ... Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. [1]

  4. Glycine - Wikipedia

    en.wikipedia.org/wiki/Glycine

    Glycine (symbol Gly or G; [6] / ˈ ɡ l aɪ s iː n / ⓘ) [7] is an amino acid that has a single hydrogen atom as its side chain. It is the simplest stable amino acid. Glycine is one of the proteinogenic amino acids. It is encoded by all the codons starting with GG (GGU, GGC, GGA, GGG). [8]

  5. Proteinogenic amino acid - Wikipedia

    en.wikipedia.org/wiki/Proteinogenic_amino_acid

    The table below lists the abundance of amino acids in E.coli cells and the metabolic cost (ATP) for synthesis of the amino acids. Negative numbers indicate the metabolic processes are energy favorable and do not cost net ATP of the cell. [12] The abundance of amino acids includes amino acids in free form and in polymerization form (proteins).

  6. Acid dissociation constant - Wikipedia

    en.wikipedia.org/wiki/Acid_dissociation_constant

    In chemistry, an acid dissociation constant (also known as acidity constant, or acid-ionization constant; denoted ⁠ ⁠) is a quantitative measure of the strength of an acid in solution. It is the equilibrium constant for a chemical reaction

  7. Histidine - Wikipedia

    en.wikipedia.org/wiki/Histidine

    Histidine ball and stick model spinning. Histidine (symbol His or H) [2] is an essential amino acid that is used in the biosynthesis of proteins.It contains an α-amino group (which is in the protonated –NH 3 + form under biological conditions), a carboxylic acid group (which is in the deprotonated –COO − form under biological conditions), and an imidazole side chain (which is partially ...

  8. Pyrrolysine - Wikipedia

    en.wikipedia.org/wiki/Pyrrolysine

    Pyrrolysine ball and stick model spinning. Pyrrolysine (symbol Pyl or O; [2] encoded by the 'amber' stop codon UAG) is an α-amino acid that is used in the biosynthesis of proteins in some methanogenic archaea and bacteria; [3] [4] it is not present in humans.

  9. Lysine - Wikipedia

    en.wikipedia.org/wiki/Lysine

    Lysine ball and stick model spinning. Lysine (symbol Lys or K) [2] is an α-amino acid that is a precursor to many proteins.Lysine contains an α-amino group (which is in the protonated −NH + 3 form when the lysine is dissolved in water at physiological pH), an α-carboxylic acid group (which is in the deprotonated −COO − form when the lysine is dissolved in water at physiological pH ...