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ggplot2 is an open-source data visualization package for the statistical programming language R.Created by Hadley Wickham in 2005, ggplot2 is an implementation of Leland Wilkinson's Grammar of Graphics—a general scheme for data visualization which breaks up graphs into semantic components such as scales and layers. ggplot2 can serve as a replacement for the base graphics in R and contains a ...
Matplotlib (portmanteau of MATLAB, plot, and library [3]) is a plotting library for the Python programming language and its numerical mathematics extension NumPy.It provides an object-oriented API for embedding plots into applications using general-purpose GUI toolkits like Tkinter, wxPython, Qt, or GTK.
Project Jupyter's name is a reference to the three core programming languages supported by Jupyter, which are Julia, Python and R. Its name and logo are an homage to Galileo's discovery of the moons of Jupiter, as documented in notebooks attributed to Galileo. Jupyter is financially sponsored by NumFOCUS. [1]
Spyder is extensible with first-party and third-party plugins, [8] and includes support for interactive tools for data inspection and embeds Python-specific code quality assurance and introspection instruments, such as Pyflakes, Pylint [9] and Rope. [10] [11] Spyder uses Qt for its GUI and is designed to use either of the PyQt or PySide Python ...
IPython continued to exist as a Python shell and kernel for Jupyter, but the notebook interface and other language-agnostic parts of IPython were moved under the Jupyter name. [ 11 ] [ 12 ] Jupyter is language agnostic and its name is a reference to core programming languages supported by Jupyter, which are Julia , Python , and R .
An important example of a length is the word metric: given a presentation of a group by generators and relations, the length of an element is the length of the shortest word expressing it. Coxeter groups (including the symmetric group ) have combinatorial important length functions, using the simple reflections as generators (thus each simple ...
In computer programming, a variable-length array (VLA), also called variable-sized or runtime-sized, is an array data structure whose length is determined at runtime, instead of at compile time. [1] In the language C , the VLA is said to have a variably modified data type that depends on a value (see Dependent type ).
fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.