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Free energy diagram of n-butane as a function of dihedral angle. In stereochemistry, a torsion angle is defined as a particular example of a dihedral angle, describing the geometric relation of two parts of a molecule joined by a chemical bond. [4] [5] Every set of three non-colinear atoms of a molecule defines a half-plane. As explained above ...
Torsion of a square section bar Example of torsion mechanics. In the field of solid mechanics, torsion is the twisting of an object due to an applied torque [1] [2].Torsion could be defined as strain [3] [4] or angular deformation [5], and is measured by the angle a chosen section is rotated from its equilibrium position [6].
Protein torsion angles are calculated for phi, psi, omega (which corresponds to the peptide bond) and chi1 (the first side chain torsion angle) using standard IUPAC definitions. These values are listed under four different column headers: PHI, PSI, OMEGA and CHI1. All torsion angles are reported in degrees.
In biochemistry, a Ramachandran plot (also known as a Rama plot, a Ramachandran diagram or a [φ,ψ] plot), originally developed in 1963 by G. N. Ramachandran, C. Ramakrishnan, and V. Sasisekharan, [1] is a way to visualize energetically allowed regions for backbone dihedral angles ( also called as torsional angles , phi and psi angles ) ψ ...
In proteins there are four major torsion angles of interest: phi, psi, omega and chi-1. Traditionally protein NMR spectroscopists have used vicinal J-coupling information and the Karplus relation to determine approximate backbone torsion angle constraints for phi and chi-1 angles. [3] However, several studies in the early 1990s pointed out the ...
torsion coefficient also called torsion constant newton meter per radian (N⋅m/rad) lambda: cosmological constant: per second squared (s −2) wavelength: meter (m) linear charge density: coulomb per meter (C/m) eigenvalue: non-zero vector: mu: magnetic moment
where J is the 3 J coupling constant, is the dihedral angle, and A, B, and C are empirically derived parameters whose values depend on the atoms and substituents involved. [3] The relationship may be expressed in a variety of equivalent ways e.g. involving cos 2φ rather than cos 2 φ —these lead to different numerical values of A , B , and C ...
The polar angle may be called inclination angle, zenith angle, normal angle, or the colatitude. The user may choose to ignore the inclination angle and use the elevation angle instead, which is measured upward between the reference plane and the radial line—i.e., from the reference plane upward (towards to the positive z-axis) to the radial line.