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To display molecules with Jmol, your browser needs to be Java enabled. Two examples of Jmol images in a wiki are here and here. These use Jmol to show medium sized molecules with buttons to control the rotation of the molecules. The right mouse button opens a Jmol menu while the left mouse button can be used to move the image.
Jmol is computer software for molecular modelling of chemical structures in 3 dimensions. [2] It is an open-source Java viewer for chemical structures in 3D. [3] The name originated from ava (the programming language) + [mol]ecules, and also the mol file format. JSmol is an implementation in JavaScript of the functionality of Jmol. [4]
Between option 2 and 3, I don't know. Option 3 enables the use of gzipped files which can be interesting for very big files, but all files will be stored in the Image namespace (but categories can still be used). --NicoV 20:35, 27 April 2006 (UTC) I have one concern about putting files in the image space.
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RasMol includes a scripting language, to perform many functions such as selecting certain protein chains, changing colors, etc. Jmol and Sirius software have incorporated this language into their commands. Protein Data Bank (PDB) files can be downloaded for visualization from members of the Worldwide Protein Data Bank (wwPDB).
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