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  2. Entrez - Wikipedia

    en.wikipedia.org/wiki/Entrez

    The Entrez logo. The Entrez (/ ɒ n ˈ t r eɪ /) [1] Global Query Cross-Database Search System is a federated search engine, or web portal that allows users to search many discrete health sciences databases at the National Center for Biotechnology Information (NCBI) website. [2]

  3. National Center for Biotechnology Information - Wikipedia

    en.wikipedia.org/wiki/National_Center_for...

    The Entrez Global Query Cross-Database Search System is used at NCBI for all the major databases such as Nucleotide and Protein Sequences, Protein Structures, PubMed, Taxonomy, Complete Genomes, OMIM, and several others. [9] Entrez is both an indexing and retrieval system having data from various sources for biomedical research.

  4. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    DDBJ (Japan), GenBank (USA) and European Nucleotide Archive (Europe) are repositories for nucleotide sequence data from all organisms. All three accept nucleotide sequence submissions, and then exchange new and updated data on a daily basis to achieve optimal synchronisation between them.

  5. List of academic databases and search engines - Wikipedia

    en.wikipedia.org/wiki/List_of_academic_databases...

    Search engine for natural and physical sciences, social sciences, and humanities. Incorporates arXiv, PubMed, and SciELO. Integrated with ORCID for overlay and peer review services. All articles display Altmetric scores. Free ScienceOpen [135] Scientific Information Database (SID) Engineering, technology, medical science, basic science, human ...

  6. International Nucleotide Sequence Database Collaboration

    en.wikipedia.org/wiki/International_Nucleotide...

    The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. [1] It involves the following computerized databases : NIG 's DNA Data Bank of Japan ( Japan ), NCBI 's GenBank ( USA ) and the EMBL - EBI 's European Nucleotide Archive ( EMBL ).

  7. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    Linking and profiling sequence alignment data from NCBI-BLAST results with major sequence analysis servers/services: Nucleotide, peptide: 2010 SAM Local and global search with profile Hidden Markov models, more sensitive than PSI-BLAST: Both: Karplus K, Krogh A [15] 1999 SSEARCH Smith-Waterman search, slower but more sensitive than FASTA: Both ...

  8. United States National Library of Medicine - Wikipedia

    en.wikipedia.org/wiki/United_States_National...

    The National Library of Medicine runs the National Center for Biotechnology Information, which houses biological databases (PubMed among them) that are freely accessible on the Internet through the Entrez search engine [8] and Lister Hill National Center For Biomedical Communications. [9]

  9. BLAST (biotechnology) - Wikipedia

    en.wikipedia.org/wiki/BLAST_(biotechnology)

    In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.